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shawn.w.foley • 670
Status: New
Handle: @shawn.w.foley43234
Reputation: 670
Email: s*******@gsk.com
Joined: 8 months ago
Google Scholar: Shawn W Foley
Last seen: 13 months ago
Location: USA

Posts Awards
4
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1
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140
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Answer: A: issue with ifelse statement
4 Votes | 1 Reply
8 months ago
shawn.w.foley • 670
0
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1
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187
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Comment: C: Removing adaptors from smallRNA seq data
0 Votes | 1 Reply
8 months ago
shawn.w.foley • 670
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134
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Comment: C: Label gene name using EnhancedVolcano
0 Votes | 1 Reply
8 months ago
shawn.w.foley • 670
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Comment: C: RNA seq data shows no gene expression but qPCR shows the same gene is upregulate
0 Votes | 0 Replies
8 months ago
shawn.w.foley • 670
3
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Comment: C: RNA seq data shows no gene expression but qPCR shows the same gene is upregulate
3 Votes | 1 Reply
8 months ago
shawn.w.foley • 670
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178
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Comment: C: any idea about histogram(graphic) clustering?
0 Votes | 1 Reply
8 months ago
shawn.w.foley • 670
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169
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Comment: C: Can I convert from PSI to RPKM?
0 Votes | 1 Reply
9 months ago
shawn.w.foley • 670
2
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169
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Answer: A: Can I convert from PSI to RPKM?
2 Votes | 2 Replies
9 months ago
shawn.w.foley • 670
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Comment: C: gcRMA normalize and run differential expression for signal intensity data withou
0 Votes | 0 Replies
9 months ago
shawn.w.foley • 670
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Comment: C: bioinformatics tools to connect modifications on RNA to its structure
0 Votes | 0 Replies
9 months ago
shawn.w.foley • 670
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107
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gcRMA normalize and run differential expression for signal intensity data without CEL files
1 Vote | 2 Replies
9 months ago
shawn.w.foley • 670 • updated 9 months ago
Kevin Blighe 43k
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Comment: C: bioinformatics tools to connect modifications on RNA to its structure
0 Votes | 0 Replies
9 months ago
shawn.w.foley • 670
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121
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Answer: A: Extract and retain only chromosome info in GWAS sumstats file
3 Votes | 1 Reply
9 months ago
shawn.w.foley • 670
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Comment: C: Help: how to use wilcox.test with a SummarizedExperiment object?
0 Votes | 1 Reply
9 months ago
shawn.w.foley • 670
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Answer: A: Can detection of SNP from DNA (Intronic part) and mRNA (Exonic Part) make some
0 Votes | 0 Replies
9 months ago
shawn.w.foley • 670
1
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Answer: A: How to group gene dataset and run t.test for each row for every gene in R?
1 Vote | 1 Reply
9 months ago
shawn.w.foley • 670
2
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1.1k
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ChIP-seq differential binding with multiple replicates using MACS2 bdgdiff.
2 Votes | 2 Replies
23 months ago
shawn.w.foley • 670 • updated 9 months ago
ATpoint 17k
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Comment: C: CCLE miRNA expression data
0 Votes | 1 Reply
9 months ago
shawn.w.foley • 670
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136
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Answer: A: CCLE miRNA expression data
0 Votes | 1 Reply
9 months ago
shawn.w.foley • 670
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175
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Comment: C: Should I keep all HTSeq table informations for edgeR analysis?
0 Votes | 0 Replies
9 months ago
shawn.w.foley • 670
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175
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Answer: A: Should I keep all HTSeq table informations for edgeR analysis?
0 Votes | 1 Reply
9 months ago
shawn.w.foley • 670
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298
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Comment: C: upSet R plot for variant calling
0 Votes | 1 Reply
9 months ago
shawn.w.foley • 670
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144
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Comment: C: Tool to perform GSEA on mapped genes
0 Votes | 0 Replies
9 months ago
shawn.w.foley • 670
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130
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Answer: A: Variants in Exon or Intron
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9 months ago
shawn.w.foley • 670
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144
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Answer: A: Tool to perform GSEA on mapped genes
1 Vote | 0 Replies
9 months ago
shawn.w.foley • 670
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163
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Answer: A: Estimate percentage of alternative splicing
0 Votes | 0 Replies
9 months ago
shawn.w.foley • 670
1
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Comment: C: Including bioinformatics into an agriculture/horticulture dissertation project
1 Vote | 0 Replies
9 months ago
shawn.w.foley • 670
1
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161
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Comment: C: Including bioinformatics into an agriculture/horticulture dissertation project
1 Vote | 1 Reply
9 months ago
shawn.w.foley • 670
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252
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Comment: C: Question about differentially expressed genes selection for low sample size data
0 Votes | 1 Reply
10 months ago
shawn.w.foley • 670
2
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252
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Comment: C: Question about differentially expressed genes selection for low sample size data
2 Votes | 1 Reply
10 months ago
shawn.w.foley • 670
3
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252
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Answer: A: Question about differentially expressed genes selection for low sample size data
3 Votes | 2 Replies
10 months ago
shawn.w.foley • 670
2
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1
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184
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Mutect2 "somatic" variants with resistant tissue culture lines
2 Votes | 1 Reply
10 months ago
shawn.w.foley • 670 • updated 10 months ago
Biostar 20
4
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162
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Answer: A: Trouble manipulating dataset
4 Votes | 1 Reply
10 months ago
shawn.w.foley • 670
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204
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Comment: C: Something strange in RNA-seq raw reads, It is contamination or not?
0 Votes | 0 Replies
10 months ago
shawn.w.foley • 670
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204
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Answer: A: Something strange in RNA-seq raw reads, It is contamination or not?
0 Votes | 1 Reply
10 months ago
shawn.w.foley • 670
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1.3k
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Comment: C: Is it possible to convert .CHP files to .CEL?
0 Votes | 0 Replies
10 months ago
shawn.w.foley • 670
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188
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Comment: C: Fold change cut off enrichment analysis
0 Votes | 1 Reply
10 months ago
shawn.w.foley • 670
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188
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Answer: A: Fold change cut off enrichment analysis
0 Votes | 1 Reply
10 months ago
shawn.w.foley • 670
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246
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Comment: C: Multiple testing correction issue
1 Vote | 0 Replies
10 months ago
shawn.w.foley • 670
0
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246
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Answer: A: Multiple testing correction issue
0 Votes | 1 Reply
10 months ago
shawn.w.foley • 670
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