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shawn.w.foley • 670
Status: New
Handle: @shawn.w.foley43234
Status: New
Reputation: 670
Email: s*******@gsk.com
Joined: 4 months ago
Google Scholar: Shawn W Foley
Last seen: 9 months ago
Location: USA

Posts Awards
90 results • Page 1 of 3
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Answer: A: issue with ifelse statement
4 months ago shawn.w.foley • 670
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122
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Comment: C: Removing adaptors from smallRNA seq data
4 months ago shawn.w.foley • 670
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95
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Comment: C: Label gene name using EnhancedVolcano
4 months ago shawn.w.foley • 670
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Comment: C: RNA seq data shows no gene expression but qPCR shows the same gene is upregulate
4 months ago shawn.w.foley • 670
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124
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Comment: C: RNA seq data shows no gene expression but qPCR shows the same gene is upregulate
4 months ago shawn.w.foley • 670
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144
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Comment: C: any idea about histogram(graphic) clustering?
4 months ago shawn.w.foley • 670
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125
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Comment: C: Can I convert from PSI to RPKM?
4 months ago shawn.w.foley • 670
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125
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Answer: A: Can I convert from PSI to RPKM?
4 months ago shawn.w.foley • 670
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Comment: C: gcRMA normalize and run differential expression for signal intensity data withou
4 months ago shawn.w.foley • 670
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Comment: C: bioinformatics tools to connect modifications on RNA to its structure
4 months ago shawn.w.foley • 670
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gcRMA normalize and run differential expression for signal intensity data without CEL files
4 months ago shawn.w.foley • 670 • updated 4 months ago Kevin Blighe 43k
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Comment: C: bioinformatics tools to connect modifications on RNA to its structure
4 months ago shawn.w.foley • 670
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85
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Answer: A: Extract and retain only chromosome info in GWAS sumstats file
4 months ago shawn.w.foley • 670
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Comment: C: Help: how to use wilcox.test with a SummarizedExperiment object?
4 months ago shawn.w.foley • 670
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Answer: A: Can detection of SNP from DNA (Intronic part) and mRNA (Exonic Part) make some
4 months ago shawn.w.foley • 670
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Answer: A: How to group gene dataset and run t.test for each row for every gene in R?
4 months ago shawn.w.foley • 670
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ChIP-seq differential binding with multiple replicates using MACS2 bdgdiff.
19 months ago shawn.w.foley • 670 • updated 4 months ago ATpoint 17k
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110
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Comment: C: CCLE miRNA expression data
4 months ago shawn.w.foley • 670
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110
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Answer: A: CCLE miRNA expression data
4 months ago shawn.w.foley • 670
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152
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Comment: C: Should I keep all HTSeq table informations for edgeR analysis?
5 months ago shawn.w.foley • 670
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152
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Answer: A: Should I keep all HTSeq table informations for edgeR analysis?
5 months ago shawn.w.foley • 670
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247
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Comment: C: upSet R plot for variant calling
5 months ago shawn.w.foley • 670
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119
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Comment: C: Tool to perform GSEA on mapped genes
5 months ago shawn.w.foley • 670
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111
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Answer: A: Variants in Exon or Intron
5 months ago shawn.w.foley • 670
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119
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Answer: A: Tool to perform GSEA on mapped genes
5 months ago shawn.w.foley • 670
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141
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Answer: A: Estimate percentage of alternative splicing
5 months ago shawn.w.foley • 670
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Comment: C: Including bioinformatics into an agriculture/horticulture dissertation project
5 months ago shawn.w.foley • 670
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141
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Comment: C: Including bioinformatics into an agriculture/horticulture dissertation project
5 months ago shawn.w.foley • 670
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214
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Comment: C: Question about differentially expressed genes selection for low sample size data
5 months ago shawn.w.foley • 670
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214
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Comment: C: Question about differentially expressed genes selection for low sample size data
5 months ago shawn.w.foley • 670
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Answer: A: Question about differentially expressed genes selection for low sample size data
5 months ago shawn.w.foley • 670
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168
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Mutect2 "somatic" variants with resistant tissue culture lines
6 months ago shawn.w.foley • 670 • updated 5 months ago Biostar 20
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Answer: A: Trouble manipulating dataset
5 months ago shawn.w.foley • 670
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Comment: C: Something strange in RNA-seq raw reads, It is contamination or not?
5 months ago shawn.w.foley • 670
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Answer: A: Something strange in RNA-seq raw reads, It is contamination or not?
5 months ago shawn.w.foley • 670
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Comment: C: Is it possible to convert .CHP files to .CEL?
6 months ago shawn.w.foley • 670
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164
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Comment: C: Fold change cut off enrichment analysis
6 months ago shawn.w.foley • 670
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Answer: A: Fold change cut off enrichment analysis
6 months ago shawn.w.foley • 670
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Comment: C: Multiple testing correction issue
6 months ago shawn.w.foley • 670
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Answer: A: Multiple testing correction issue
6 months ago shawn.w.foley • 670
90 results • Page 1 of 3
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