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Comment: Comment: Retrieve only protein coding esnsemble gene ids and gene symbols
9 months ago by Kermit ▴ 90
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15k
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Comment: Comment: Mapping Ensembl Gene IDs with dot suffix
9 months ago by Kermit ▴ 90
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1.8k
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Comment: Comment: Quantify Isoforms in RNA-Seq data
9 months ago by Kermit ▴ 90
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1.8k
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Comment: Comment: Quantify Isoforms in RNA-Seq data
9 months ago by Kermit ▴ 90
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1.8k
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Comment: Comment: Quantify Isoforms in RNA-Seq data
10 months ago by Kermit ▴ 90
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3.0k
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Comment: Comment: STAR-Fusion: Problem in interpreting
10 months ago by Kermit ▴ 90
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Comment: Comment: Must paired-end reads be in the same order in the two files for input to Tophat?
10 months ago by Kermit ▴ 90
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33k
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Comment: Comment: Sjdboverhang Option In Star
10 months ago by Kermit ▴ 90
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1.8k
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Comment: Comment: bbsplit running slow or out of memory?
10 months ago by Kermit ▴ 90
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37k
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Comment: Comment: How to know that your RNA-seq is stranded or not?
10 months ago by Kermit ▴ 90
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7.0k
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Comment: Comment: bbmap split paired-end reads back into separated fastq files?
10 months ago by Kermit ▴ 90
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14k
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Comment: Comment: How to identify 16s sequences from binning data(contigs)?
10 months ago by Kermit ▴ 90
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786
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Comment: Comment: Removing overrepresented sequences in paired end RNA-seq
10 months ago by Kermit ▴ 90
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Comment: Comment: removing overrepresented sequences from rna-seq
10 months ago by Kermit ▴ 90
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Comment: Comment: should non-protein-coding rna(e.g. lncRNA) be removed in RNA-Seq differential ex
11 months ago by Kermit ▴ 90
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66k
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Comment: Comment: How do I explain the difference between edgeR, LIMMA, DESeq etc. to experimental
11 months ago by Kermit ▴ 90
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44k
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Comment: Comment: How to filter vcf file on minimum genotype depth and quality for each sample
11 months ago by Kermit ▴ 90
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44k
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Comment: Comment: How to filter vcf file on minimum genotype depth and quality for each sample
11 months ago by Kermit ▴ 90
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1.5k
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Comment: Comment: Why are some WES files larger than others?
11 months ago by Kermit ▴ 90
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1.5k
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Comment: Comment: Why are some WES files larger than others?
11 months ago by Kermit ▴ 90
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1.3k
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Comment: Comment: If RNA-seq includes miRNA genes then why are there miRNA specific pipelines?
13 months ago by Kermit ▴ 90
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1.3k
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Comment: Comment: If RNA-seq includes miRNA genes then why are there miRNA specific pipelines?
13 months ago by Kermit ▴ 90
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674
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Comment: Comment: How many basepairs are genes padded by in WES?
14 months ago by Kermit ▴ 90
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19k
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Comment: Comment: Apple M1 processor for bioinformactics
17 months ago by Kermit ▴ 90
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Comment: Comment: VEP outputs the similar INFO CSQ data multiple times
19 months ago by Kermit ▴ 90
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34k
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Comment: Comment: Snp Quality In Vcf File
19 months ago by Kermit ▴ 90
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12k
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Comment: Comment: Illumina cpg probe ID conversion to chromosomal location?
19 months ago by Kermit ▴ 90
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573
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Comment: Comment: Do LoF/GoF count toward transcript count?
20 months ago by Kermit ▴ 90
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5.1k
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Comment: Comment: problem in EnsemblID to gene symbol conversion in TCGA data
20 months ago by Kermit ▴ 90
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1.1k
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Comment: Comment: Annotate list of Ensembl genes
20 months ago by Kermit ▴ 90
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851
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Comment: Comment: TCGA - Is vital_status subject to follow_up duration?
20 months ago by Kermit ▴ 90
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1.3k
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Comment: Comment: If RNA-seq includes miRNA genes then why are there miRNA specific pipelines?
20 months ago by Kermit ▴ 90
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1
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1.3k
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Comment: Comment: If RNA-seq includes miRNA genes then why are there miRNA specific pipelines?
20 months ago by Kermit ▴ 90
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1
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1.3k
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Comment: Comment: If RNA-seq includes miRNA genes then why are there miRNA specific pipelines?
20 months ago by Kermit ▴ 90
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1
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1.1k
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Comment: Comment: Gene types to use for RNA counts case-control
20 months ago by Kermit ▴ 90
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1.1k
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Comment: Comment: Gene types to use for RNA counts case-control
20 months ago by Kermit ▴ 90
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2.4k
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Comment: Comment: Why isn't GWAS used in oncology?
20 months ago by Kermit ▴ 90
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2.4k
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Comment: Comment: Why isn't GWAS used in oncology?
20 months ago by Kermit ▴ 90
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2.4k
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Comment: Comment: Why isn't GWAS used in oncology?
21 months ago by Kermit ▴ 90
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1.0k
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Comment: Comment: Reference counts for RNA-seq
21 months ago by Kermit ▴ 90
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1
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823
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Comment: Comment: What are GL*.* values in chr column of rna seq counts?
21 months ago by Kermit ▴ 90
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21k
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Comment: Comment: Differences between FPKM and FPKM-UQ files in gene expression analysis
21 months ago by Kermit ▴ 90
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699
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Comment: C: Noncoding annotations for WGS?
4.4 years ago by Kermit ▴ 90
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1.2k
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Comment: C: Are SV tools as thorough in CNV detection as CNVkit?
4.7 years ago by Kermit ▴ 90
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3.1k
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Comment: C: VCF - what are overlapping variants?
4.8 years ago by Kermit ▴ 90
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1.1k
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Comment: C: Are small insertions always single-stranded?
4.8 years ago by Kermit ▴ 90
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3.1k
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Comment: C: VCF - what are overlapping variants?
4.8 years ago by Kermit ▴ 90
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1.8k
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Comment: C: VCF - does mother or father come first in the comma separated ALT
4.8 years ago by Kermit ▴ 90
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1.8k
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Comment: A: VCF - does mother or father come first in the comma separated ALT
4.8 years ago by Kermit ▴ 90
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1.8k
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Comment: C: VCF - does mother or father come first in the comma separated ALT
4.8 years ago by Kermit ▴ 90
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