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About
snishtala03 • 10
Status:
New
Handle:
@snishtala0337463
Reputation:
10
Joined:
19 months ago
Last seen:
22 months ago
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0
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241
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Comment:
C: count reads mapped to multiple locations only once
21 months ago
snishtala03
• 10
0
Votes
3
Replies
241
Views
count reads mapped to multiple locations only once
bwa
alignment
samtools
multiple mapping
21 months ago
snishtala03
• 10
0
Votes
0
Replies
257
Views
Answer:
A: samtools stats result different from samtools flagstat
21 months ago
snishtala03
• 10
1
Vote
1
Reply
257
Views
samtools stats result different from samtools flagstat
samtools
21 months ago
snishtala03
• 10
0
Votes
1
Reply
192
Views
Comment:
C: bbmerge merged read smaller that original reads
22 months ago
snishtala03
• 10
1
Vote
3
Replies
192
Views
bbmerge merged read smaller that original reads
bbmerge
fastq
alignment
flash
vsearch
22 months ago
snishtala03
• 10
• updated 22 months ago
RamRS
21k
0
Votes
1
Reply
9.9k
Views
Comment:
C: Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files. And remov
22 months ago
snishtala03
• 10
0
Votes
1
Reply
9.9k
Views
Comment:
C: Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files. And remov
22 months ago
snishtala03
• 10
0
Votes
1
Reply
9.9k
Views
Comment:
A: Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files. And remov
22 months ago
snishtala03
• 10
0
Votes
1
Reply
9.9k
Views
Comment:
C: Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files. And remov
22 months ago
snishtala03
• 10
0
Votes
0
Replies
2.4k
Views
Comment:
C: SAM flag and select reads that map uniquely
22 months ago
snishtala03
• 10
0
Votes
0
Replies
212
Views
Comment:
C: Get read start site using bedtools from bam file after merging paired end data
22 months ago
snishtala03
• 10
0
Votes
1
Reply
212
Views
Comment:
C: Get read start site using bedtools from bam file after merging paired end data
22 months ago
snishtala03
• 10
0
Votes
3
Replies
212
Views
Get read start site using bedtools from bam file after merging paired end data
RNA-Seq
bbmerge
bedtools
samtools
alignment
22 months ago
snishtala03
• 10
0
Votes
0
Replies
601
Views
read simulation and quantification
RNA-Seq
simulation
quantification
fasta
3.4 years ago
snishtala03
• 10
2
Votes
6
Replies
2.4k
Views
GAGE or GSEABase using expression data and pathway.gmt file for mouse
RNA-Seq
R
GAGE
GSEA
Pathway
3.7 years ago
snishtala03
• 10
• updated 3.7 years ago
bigmawen
• 310
0
Votes
0
Replies
2.4k
Views
Comment:
C: GAGE or GSEABase using expression data and pathway.gmt file for mouse
3.7 years ago
snishtala03
• 10
0
Votes
0
Replies
2.6k
Views
Comment:
C: How to convert UCSC transcript(isforms) ids to Ensemble transcript ids?
3.9 years ago
snishtala03
• 10
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