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Comment: C: Correct way to calculate VAF (Variant allele fraction) from a VCF file
3.2 years ago by prasundutta87 ▴ 660
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0
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11k
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Comment: C: Correct way to calculate VAF (Variant allele fraction) from a VCF file
3.2 years ago by prasundutta87 ▴ 660
0
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1
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11k
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Comment: C: Correct way to calculate VAF (Variant allele fraction) from a VCF file
3.2 years ago by prasundutta87 ▴ 660
0
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0
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2.5k
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Comment: C: GATK tool to merge INDEL with SNPs with the same set of samples
3.2 years ago by prasundutta87 ▴ 660
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0
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1.5k
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Comment: C: bcftools norm resulting in '*' in alternate allele
3.2 years ago by prasundutta87 ▴ 660
0
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1
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3.2k
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Comment: C: Determine the sex of a sample from a .vcf
3.2 years ago by prasundutta87 ▴ 660
0
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0
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837
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Comment: C: Annotating variants using latest version fof the genome
3.5 years ago by prasundutta87 ▴ 660
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1
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837
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Comment: C: Annotating variants using latest version fof the genome
3.5 years ago by prasundutta87 ▴ 660
1
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0
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2.3k
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Comment: C: Identifying Private SNPs between multi sample vcf files.
3.7 years ago by prasundutta87 ▴ 660
0
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1
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948
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Comment: C: methylation % calculation for targeted region
3.8 years ago by prasundutta87 ▴ 660
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0
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948
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Comment: C: methylation % calculation for targeted region
3.8 years ago by prasundutta87 ▴ 660
0
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0
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2.9k
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Comment: C: EPIC methylation manifest GRch38 query
3.9 years ago by prasundutta87 ▴ 660
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1
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6.4k
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Comment: C: Is plotMDS (from limma package) a PCA (Principal Component Analysis) or a PCoA (
updated 3.9 years ago by 82k • written 3.9 years ago by ▴ 660
0
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1
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2.1k
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Comment: C: query regarding using manifest and annotation in Minfi (EPIC Methylation array a
3.9 years ago by prasundutta87 ▴ 660
0
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0
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762
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Comment: C: array jobs accessing one binary in population genetics software
4.1 years ago by prasundutta87 ▴ 660
0
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0
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3.1k
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Comment: C: illumina sequencing dual index query
4.2 years ago by prasundutta87 ▴ 660
0
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1
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3.1k
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Comment: C: illumina sequencing dual index query
4.2 years ago by prasundutta87 ▴ 660
0
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1
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3.1k
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Comment: C: illumina sequencing dual index query
4.2 years ago by prasundutta87 ▴ 660
0
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0
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3.1k
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Comment: C: illumina sequencing dual index query
4.2 years ago by prasundutta87 ▴ 660
0
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1
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3.1k
views
Comment: C: illumina sequencing dual index query
4.2 years ago by prasundutta87 ▴ 660
0
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0
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1.5k
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Comment: C: outliers in XP-EHH
5.1 years ago by prasundutta87 ▴ 660
0
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1
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4.8k
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Comment: C: Difference between Private SNPs and Singleton SNPs
5.2 years ago by prasundutta87 ▴ 660
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1
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4.8k
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Comment: C: Difference between Private SNPs and Singleton SNPs
5.2 years ago by prasundutta87 ▴ 660
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1
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5.0k
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Comment: C: PCAtools: everything Principal Components Analysis
5.2 years ago by prasundutta87 ▴ 660
1
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1
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5.0k
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Comment: A: PCAtools: everything Principal Components Analysis
5.2 years ago by prasundutta87 ▴ 660
1
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2
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8.8k
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Comment: A: HISAT2 MAPQ scoring scheme
5.3 years ago by prasundutta87 ▴ 660
0
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0
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3.3k
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Comment: C: manhattan plot with Fst values
5.4 years ago by prasundutta87 ▴ 660
0
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1
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3.3k
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Comment: A: manhattan plot with Fst values
5.4 years ago by prasundutta87 ▴ 660
0
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1
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2.2k
views
Comment: C: no gene_id for tRNA in GFF3
5.5 years ago by prasundutta87 ▴ 660
1
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1
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2.2k
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Comment: C: no gene_id for tRNA in GFF3
5.5 years ago by prasundutta87 ▴ 660
0
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1
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2.2k
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Comment: C: no gene_id for tRNA in GFF3
5.5 years ago by prasundutta87 ▴ 660
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0
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1.6k
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Comment: C: allele specific expression (ASE) reference ratio plot query
5.5 years ago by prasundutta87 ▴ 660
0
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0
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1.7k
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Comment: C: Filtering results difference amongst VCF files
5.6 years ago by prasundutta87 ▴ 660
0
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0
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1.7k
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Comment: C: Filtering results difference amongst VCF files
5.6 years ago by prasundutta87 ▴ 660
0
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1
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1.7k
views
Comment: C: Filtering results difference amongst VCF files
5.6 years ago by prasundutta87 ▴ 660
0
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0
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8.7k
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Comment: C: GATK 4 GenomeAnalysisTK still available? (Unable to access jarfile)
5.6 years ago by prasundutta87 ▴ 660
0
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0
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1.8k
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Comment: C: autosomal ancestry inference
5.7 years ago by prasundutta87 ▴ 660
0
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0
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4.2k
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Comment: C: PCA implementation in plink
5.7 years ago by prasundutta87 ▴ 660
0
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0
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851
views
Comment: C: query on a pre-process step involving GFF3
5.7 years ago by prasundutta87 ▴ 660
0
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0
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1.2k
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Comment: C: some questions on GFF3
5.7 years ago by prasundutta87 ▴ 660
0
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0
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2.6k
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Comment: C: gffread query for gff to gtf conversion
5.7 years ago by prasundutta87 ▴ 660
0
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0
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931
views
Comment: C: sanity check methods for checking genome assembly coordinate changes
5.8 years ago by prasundutta87 ▴ 660
0
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1
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931
views
Comment: C: sanity check methods for checking genome assembly coordinate changes
5.8 years ago by prasundutta87 ▴ 660
0
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0
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1.2k
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Comment: C: variant calling after reference genome is updated
5.8 years ago by prasundutta87 ▴ 660
0
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0
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1.2k
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Comment: C: variant calling after reference genome is updated
5.8 years ago by prasundutta87 ▴ 660
0
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1
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1.2k
views
Comment: C: variant calling after reference genome is updated
5.8 years ago by prasundutta87 ▴ 660
0
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0
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4.7k
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Comment: C: Strategy in WGS variant calling using GATK (CombineGVCF step)
6.0 years ago by prasundutta87 ▴ 660
0
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1
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4.7k
views
Comment: C: Strategy in WGS variant calling using GATK (CombineGVCF step)
6.0 years ago by prasundutta87 ▴ 660
0
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2
replies
4.7k
views
Comment: C: Strategy in WGS variant calling using GATK (CombineGVCF step)
6.0 years ago by prasundutta87 ▴ 660
0
votes
0
replies
4.7k
views
Comment: C: Strategy in WGS variant calling using GATK (CombineGVCF step)
6.0 years ago by prasundutta87 ▴ 660
159 results • Page 2 of 4
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