Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
4
votes
1
reply
848
views
Answer: Answer: Viewing chromatograms on linux
8 months ago by colindaven 6.4k
6
votes
2
replies
3.6k
views
Answer: Answer: A list of technical advantages of Snakemake over Nextflow | Cloud solution for S
8 months ago by colindaven 6.4k
2
votes
0
replies
969
views
Answer: Answer: For high quality Telomere to telomere assemblies, is short read polishing still
8 months ago by colindaven 6.4k
0
votes
0
replies
308
views
assembly: purge_dups removes too much sequence
purge_dups assembly nanopore repeats plants
8 months ago by colindaven 6.4k
0
votes
0
replies
1.3k
views
Comment: Comment: Running purge_dups on a hybrid assembly (optical mapping + reads)
8 months ago by colindaven 6.4k
0
votes
0
replies
890
views
Comment: Comment: Looking for Part Time Work as a Compuational Chemist / Bioinformatician / LINUX
8 months ago by colindaven 6.4k
0
votes
1
reply
1.1k
views
Answer: Answer: Installing ensemble VEP by running INSTALL.pl takes too long.
8 months ago by colindaven 6.4k
0
votes
1
reply
1.3k
views
Answer: Answer: build error with vg tools
8 months ago by colindaven 6.4k
2
votes
1
reply
769
views
Answer: Answer: How to Add Mutations to the sequence
8 months ago by colindaven 6.4k
1
vote
0
replies
555
views
Comment: Comment: Zero Mapping rate
8 months ago by colindaven 6.4k
1
vote
1
reply
613
views
Answer: Answer: Detecting Inversions from Genome Alignments
8 months ago by colindaven 6.4k
0
votes
1
reply
1.2k
views
Comment: Comment: Error executing nf-core/metaboigniter pipeline
9 months ago by colindaven 6.4k
0
votes
0
replies
2.6k
views
Comment: Comment: Cannot process all the reads in a fast5 file?
9 months ago by colindaven 6.4k
1
vote
1
reply
1.2k
views
Comment: Comment: Error executing nf-core/metaboigniter pipeline
9 months ago by colindaven 6.4k
1
vote
0
replies
802
views
Answer: Answer: Computer equipment for metagenomic analysis
9 months ago by colindaven 6.4k
0
votes
0
replies
895
views
Answer: Answer: Mash distance python package
9 months ago by colindaven 6.4k
0
votes
0
replies
1.4k
views
Answer: Answer: How to get the species abundance in metagenomic data sequenced by PacBio/Nanopor
9 months ago by colindaven 6.4k
0
votes
0
replies
508
views
Answer: Answer: How to construct a pan-genome graph using vg to create a GFA graph with "W" line
9 months ago by colindaven 6.4k
0
votes
1
reply
640
views
Answer: Answer: creating vcf file after giraffe alignment
9 months ago by colindaven 6.4k
1
vote
0
replies
1.2k
views
Comment: Comment: What are bitsets in Samtools flagstat output?
9 months ago by colindaven 6.4k
0
votes
0
replies
1.3k
views
Answer: Answer: How to identify which genome the variations in the pan-genome graph originate fr
9 months ago by colindaven 6.4k
0
votes
0
replies
997
views
Answer: Answer: why does vg convert doesn't work?
9 months ago by colindaven 6.4k
0
votes
0
replies
718
views
Answer: Answer: CUDA error when I run megalodon (2.4.1) and guppy (6.0.1+652ffd1) with GPU suppo
9 months ago by colindaven 6.4k
0
votes
0
replies
787
views
Comment: Comment: bamCoverage fails in bam files with large number of small contigs in headers
9 months ago by colindaven 6.4k
0
votes
1
reply
787
views
Comment: Comment: bamCoverage fails in bam files with large number of small contigs in headers
9 months ago by colindaven 6.4k
0
votes
1
reply
787
views
Answer: Answer: bamCoverage fails in bam files with large number of small contigs in headers
9 months ago by colindaven 6.4k
0
votes
0
replies
548
views
Answer: Answer: Optimizing the parameters k in Abyss
9 months ago by colindaven 6.4k
0
votes
1
reply
1.6k
views
Comment: Comment: Merge BAM files from (totally) different references
9 months ago by colindaven 6.4k
1
vote
1
reply
1.6k
views
Answer: Answer: Merge BAM files from (totally) different references
9 months ago by colindaven 6.4k
1
vote
0
replies
1.6k
views
Answer: Answer: Bacteria WGS via illumina short read - is it normal to have 0 coverage in some r
9 months ago by colindaven 6.4k
0
votes
1
reply
1.5k
views
Comment: Comment: Speed up vg call ?
9 months ago by colindaven 6.4k
0
votes
1
reply
1.1k
views
Answer: Answer: Minimap2 map-pb index for ONT reads
9 months ago by colindaven 6.4k
2
votes
1
reply
1.4k
views
Comment: Comment: DNBseq vs Illumina
9 months ago by colindaven 6.4k
5
votes
7
replies
1.5k
views
Speed up vg call ?
vg_team vg
updated 9 months ago by ▴ 40 • written 17 months ago by 6.4k
1
vote
1
reply
1.5k
views
Answer: Answer: How can I generate a list of 100 genomic intervals from bam files?
9 months ago by colindaven 6.4k
2
votes
1
reply
1.1k
views
Comment: Comment: GATK GetPileupSummaries Java heap space
9 months ago by colindaven 6.4k
0
votes
1
reply
553
views
Answer: Answer: CNV Annotation of Segmentation Files For Canine
9 months ago by colindaven 6.4k
1
vote
0
replies
623
views
Answer: Answer: How to Detect Presence of HPV-33 in Sample Data (FASTQ, BAM, VCF on GRCh37)
10 months ago by colindaven 6.4k
2
votes
0
replies
991
views
Answer: Answer: Variant caller for Nanopore sequencing data
10 months ago by colindaven 6.4k
1
vote
0
replies
2.0k
views
Answer: Answer: Don't choose Novogene for your sequencing projects
10 months ago by colindaven 6.4k
2
votes
0
replies
1.0k
views
Answer: Answer: Why does R1 read only have length of 26 with 10X library prepration?
10 months ago by colindaven 6.4k
0
votes
1
reply
2.0k
views
Comment: Comment: Nextflow - Wait for process ending to call the next one without output
10 months ago by colindaven 6.4k
0
votes
1
reply
2.0k
views
Answer: Answer: Nextflow - Wait for process ending to call the next one without output
10 months ago by colindaven 6.4k
1
vote
1
reply
819
views
Comment: Comment: Very low average coverage obtained
10 months ago by colindaven 6.4k
4
votes
1
reply
819
views
Answer: Answer: Very low average coverage obtained
10 months ago by colindaven 6.4k
19
votes
7
replies
6.7k
views
Tutorial: scRNA-seq CITE-seq-count bioinformatics
CITE-seq-count scRNA-seq RNA-Seq
updated 10 months ago by 82k • written 4.2 years ago by 6.4k
1
vote
0
replies
1.0k
views
Answer: Answer: Run Nextflow Process in For Loop from Chromosomes 1 through N?
10 months ago by colindaven 6.4k
1
vote
1
reply
1.9k
views
Comment: Comment: Blastn and Kraken2 short reads clssification
10 months ago by colindaven 6.4k
2
votes
1
reply
1.9k
views
Answer: Answer: Blastn and Kraken2 short reads clssification
10 months ago by colindaven 6.4k
2
votes
0
replies
931
views
Answer: Answer: Nextflow: how to pass Bam and Bam index as Input Channel?
10 months ago by colindaven 6.4k
934 results • Page 3 of 19
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6