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38k
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Comment:
C: Converting a VCF with SNPs and indels to BED format
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
1
reply
38k
views
Comment:
C: Converting a VCF with SNPs and indels to BED format
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
1
reply
38k
views
Comment:
C: Converting a VCF with SNPs and indels to BED format
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
0
replies
3.2k
views
Comment:
C: RNASeq lane effect
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
0
replies
11k
views
Comment:
C: fpkm to tpm conversion
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
1
reply
11k
views
Comment:
C: fpkm to tpm conversion
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
0
replies
5.4k
views
Comment:
C: How to manipulate a gff or gtf file manually?
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
1
reply
3.4k
views
Comment:
A: Downloading annotation file for human transcriptome
6.7 years ago by
Satyajeet Khare
★ 1.6k
1
vote
1
reply
1.6k
views
Comment:
C: Length distribution of PacBio RNA-seq
6.7 years ago by
Satyajeet Khare
★ 1.6k
1
vote
1
reply
4.4k
views
Comment:
C: Aligning multiple fastq files in Bowtie2
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
0
replies
2.0k
views
Comment:
C: refseq transcriptome annotation
6.7 years ago by
Satyajeet Khare
★ 1.6k
1
vote
0
replies
1.9k
views
Comment:
C: Normalization of RNA-seq data
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
0
replies
2.0k
views
Comment:
C: Rn28s1 28S ribosomal RNA [ Mus musculus] annotation in GTF file
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
0
replies
2.0k
views
Comment:
C: T Cell Repertoire Deep Sequencing
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
0
replies
3.1k
views
Comment:
C: tophat2 "Broken pipe error"
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
1
reply
3.1k
views
Comment:
C: tophat2 "Broken pipe error"
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
1
reply
3.1k
views
Comment:
C: tophat2 "Broken pipe error"
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
1
reply
11k
views
Comment:
C: Difference between CPM and RPM for RNA-seq reada quantification
6.7 years ago by
Satyajeet Khare
★ 1.6k
1
vote
1
reply
5.8k
views
Comment:
C: RNASeq gender identification
6.7 years ago by
Satyajeet Khare
★ 1.6k
1
vote
0
replies
6.8k
views
Comment:
C: Too low mapping percentage using HISAT2 on human reference genome.
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
0
replies
2.1k
views
Comment:
C: Are all antisense transcripts from polyA enriched library RNA-seq polyadenylated
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
1
reply
11k
views
Comment:
A: Difference between CPM and RPM for RNA-seq reada quantification
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
1
reply
11k
views
Comment:
C: Difference between CPM and RPM for RNA-seq reada quantification
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
1
reply
11k
views
Comment:
C: Difference between CPM and RPM for RNA-seq reada quantification
6.7 years ago by
Satyajeet Khare
★ 1.6k
1
vote
0
replies
6.8k
views
Comment:
C: Too low mapping percentage using HISAT2 on human reference genome.
6.7 years ago by
Satyajeet Khare
★ 1.6k
3
votes
1
reply
6.8k
views
Comment:
C: Too low mapping percentage using HISAT2 on human reference genome.
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
0
replies
1.2k
views
Comment:
C: chipseq identification of enrichment of preselected genes
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
0
replies
2.6k
views
Comment:
C: Optimization of RNA-Seq data mapping with tophat2
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
1
reply
2.6k
views
Comment:
C: Optimization of RNA-Seq data mapping with tophat2
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
0
replies
5.5k
views
Comment:
C: Regarding getting gene count tables for DeSeq from StringTie using prepDE.py
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
1
reply
5.9k
views
Comment:
C: DMRcate results: How to find out which CpG sites constitute each DMR
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
1
reply
2.4k
views
Comment:
C: No differential gene expression after tuxedo protocol
6.7 years ago by
Satyajeet Khare
★ 1.6k
0
votes
1
reply
2.4k
views
Comment:
C: No differential gene expression after tuxedo protocol
6.7 years ago by
Satyajeet Khare
★ 1.6k
1
vote
0
replies
2.3k
views
Comment:
C: Differences in FPKM values for same sample in multiple comparisons
6.7 years ago by
Satyajeet Khare
★ 1.6k
1
vote
1
reply
2.0k
views
Comment:
C: hisat2 run gave 0% alignment
6.8 years ago by
Satyajeet Khare
★ 1.6k
1
vote
2
replies
2.9k
views
Comment:
C: readcufflinks shows error in R cummeRbund Package
6.8 years ago by
Satyajeet Khare
★ 1.6k
0
votes
3
replies
2.9k
views
Comment:
C: readcufflinks shows error in R cummeRbund Package
6.8 years ago by
Satyajeet Khare
★ 1.6k
0
votes
1
reply
2.9k
views
Comment:
C: readcufflinks shows error in R cummeRbund Package
6.8 years ago by
Satyajeet Khare
★ 1.6k
0
votes
1
reply
2.3k
views
Comment:
C: Differences in FPKM values for same sample in multiple comparisons
6.8 years ago by
Satyajeet Khare
★ 1.6k
0
votes
1
reply
1.6k
views
Comment:
C: DE analysis with two samples in multiple samples
6.8 years ago by
Satyajeet Khare
★ 1.6k
0
votes
1
reply
1.6k
views
Comment:
C: DE analysis with two samples in multiple samples
6.8 years ago by
Satyajeet Khare
★ 1.6k
1
vote
1
reply
4.8k
views
Comment:
C: featuresCount order sam file?
6.8 years ago by
Satyajeet Khare
★ 1.6k
0
votes
0
replies
1.5k
views
Comment:
C: Cuffdiff output file gene_exp.diff has "no" for all listed genes under "signific
6.8 years ago by
Satyajeet Khare
★ 1.6k
1
vote
0
replies
7.7k
views
Comment:
C: What is first publication/mention of term RNA-seq
7.1 years ago by
Satyajeet Khare
★ 1.6k
0
votes
0
replies
7.2k
views
Comment:
C: TCONS lincRNA ID to ensembl gene ID conversion
7.3 years ago by
Satyajeet Khare
★ 1.6k
0
votes
0
replies
2.7k
views
Comment:
C: Ion Torrent Proton RNASeq reads alignment
7.3 years ago by
Satyajeet Khare
★ 1.6k
0
votes
1
reply
3.5k
views
Comment:
C: Is it correct cammand for hisat indexing
7.3 years ago by
Satyajeet Khare
★ 1.6k
0
votes
0
replies
2.2k
views
Comment:
C: Differential expression analysis with RNA-Seq samples that vary in depth
7.3 years ago by
Satyajeet Khare
★ 1.6k
0
votes
1
reply
2.2k
views
Comment:
C: Differential expression analysis with RNA-Seq samples that vary in depth
7.3 years ago by
Satyajeet Khare
★ 1.6k
0
votes
1
reply
2.2k
views
Comment:
C: Differential expression analysis with RNA-Seq samples that vary in depth
7.3 years ago by
Satyajeet Khare
★ 1.6k
177 results • Page
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