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0
votes
1
reply
103k
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Comment:
C: How to plot coverage and depth statistics of a bam file
6.9 years ago by
bioinfo8
▴ 230
0
votes
1
reply
103k
views
Comment:
C: How to plot coverage and depth statistics of a bam file
6.9 years ago by
bioinfo8
▴ 230
0
votes
2
replies
103k
views
Comment:
C: How to plot coverage and depth statistics of a bam file
6.9 years ago by
bioinfo8
▴ 230
0
votes
1
reply
103k
views
Comment:
C: How to plot coverage and depth statistics of a bam file
6.9 years ago by
bioinfo8
▴ 230
0
votes
1
reply
11k
views
Comment:
C: Samtools: How can I extract properly-paired QC-passed reads instead of extractin
6.9 years ago by
bioinfo8
▴ 230
0
votes
1
reply
11k
views
Comment:
C: Samtools: How can I extract properly-paired QC-passed reads instead of extractin
6.9 years ago by
bioinfo8
▴ 230
0
votes
1
reply
11k
views
Comment:
C: Samtools: How can I extract properly-paired QC-passed reads instead of extractin
6.9 years ago by
bioinfo8
▴ 230
0
votes
1
reply
11k
views
Comment:
C: Samtools: How can I extract properly-paired QC-passed reads instead of extractin
6.9 years ago by
bioinfo8
▴ 230
0
votes
1
reply
11k
views
Comment:
C: Samtools: How can I extract properly-paired QC-passed reads instead of extractin
6.9 years ago by
bioinfo8
▴ 230
0
votes
1
reply
11k
views
Comment:
C: Samtools: How can I extract properly-paired QC-passed reads instead of extractin
6.9 years ago by
bioinfo8
▴ 230
0
votes
1
reply
11k
views
Comment:
C: Samtools: How can I extract properly-paired QC-passed reads instead of extractin
6.9 years ago by
bioinfo8
▴ 230
18
votes
22
replies
11k
views
Samtools: How can I extract properly-paired QC-passed reads instead of extracting only properly-paired?
samtools
bam
ngs
sequencing
paired-end
6.9 years ago by
bioinfo8
▴ 230
0
votes
1
reply
11k
views
Comment:
A: Samtools: How to extract properly-paired QC-passed reads
6.9 years ago by
bioinfo8
▴ 230
0
votes
0
replies
11k
views
Comment:
C: Samtools: How to extract properly-paired QC-passed reads
6.9 years ago by
bioinfo8
▴ 230
0
votes
1
reply
11k
views
Comment:
C: Samtools: How to extract properly-paired QC-passed reads
6.9 years ago by
bioinfo8
▴ 230
0
votes
0
replies
1.2k
views
TEQC (Target Enrichment Quality Control, R package) : Clarification on paired-end reads
TEQC
paired-end
R
bioconductor
ngs
6.9 years ago by
bioinfo8
▴ 230
0
votes
1
reply
2.4k
views
Error: Pathway analysis using Sleuth results
RNA-Seq
Sleuth
GAGE
Pathview
R
updated 7.0 years ago by
bigmawen
▴ 430 • written 7.4 years ago by
bioinfo8
▴ 230
0
votes
1
reply
8.2k
views
Comment:
C: AfterQC: Automatic Filtering, Trimming, Error Removing and Quality Control for f
7.0 years ago by
bioinfo8
▴ 230
0
votes
1
reply
8.2k
views
Comment:
C: AfterQC: Automatic Filtering, Trimming, Error Removing and Quality Control for f
7.0 years ago by
bioinfo8
▴ 230
0
votes
1
reply
8.2k
views
Answer:
A: AfterQC: Automatic Filtering, Trimming, Error Removing and Quality Control for f
7.0 years ago by
bioinfo8
▴ 230
1
vote
0
replies
2.0k
views
transcript to gene mapping after sleuth run
sleuth
kallisto
RNA-Seq
R
biomaRt
7.0 years ago by
bioinfo8
▴ 230
1
vote
0
replies
3.9k
views
Comment:
C: Using Kallisto and Sleuth for RNA-seq analysis - do I have to normalise before d
7.0 years ago by
bioinfo8
▴ 230
0
votes
1
reply
5.0k
views
Comment:
C: Understanding Sleuth output for multiple samples
7.0 years ago by
bioinfo8
▴ 230
0
votes
0
replies
5.5k
views
Comment:
C: Targeted Sequencing - Calculating The Minimum Exon Coverage
7.1 years ago by
bioinfo8
▴ 230
0
votes
1
reply
2.8k
views
Comment:
C: Convert fasta to bed (no gtf available)
7.1 years ago by
bioinfo8
▴ 230
0
votes
0
replies
2.8k
views
Comment:
C: Convert fasta to bed (no gtf available)
7.1 years ago by
bioinfo8
▴ 230
0
votes
0
replies
3.0k
views
Comment:
C: Convert cds .fa to bed
7.1 years ago by
bioinfo8
▴ 230
0
votes
1
reply
2.8k
views
Comment:
C: Convert fasta to bed (no gtf available)
7.1 years ago by
bioinfo8
▴ 230
0
votes
0
replies
2.8k
views
Comment:
C: Convert fasta to bed (no gtf available)
7.1 years ago by
bioinfo8
▴ 230
8
votes
9
replies
2.8k
views
Convert fasta to bed (no gtf available)
genome
ensembl
bed
fasta
CDS
7.1 years ago by
bioinfo8
▴ 230
7
votes
8
replies
3.0k
views
Convert cds .fa to bed
ensembl
bed
fasta
cds
ucsc
7.1 years ago by
bioinfo8
▴ 230
0
votes
0
replies
3.0k
views
Comment:
C: Convert cds .fa to bed
7.1 years ago by
bioinfo8
▴ 230
0
votes
1
reply
3.0k
views
Comment:
C: Convert cds .fa to bed
7.1 years ago by
bioinfo8
▴ 230
0
votes
1
reply
3.0k
views
Comment:
C: Convert cds .fa to bed
7.1 years ago by
bioinfo8
▴ 230
2
votes
2
replies
4.8k
views
Rstudio server on Ubuntu 16.04.2 LTS, RStudio initialization error: unable to connect to service
rstudio server
r
ubuntu
rstudio
7.2 years ago by
bioinfo8
▴ 230
1
vote
0
replies
4.8k
views
Answer:
A: Rstudio server on Ubuntu 16.04.2 LTS, RStudio initialization error: unable to co
7.2 years ago by
bioinfo8
▴ 230
0
votes
0
replies
2.1k
views
Comment:
C: Whole exomes: comparative analysis
7.2 years ago by
bioinfo8
▴ 230
0
votes
2
replies
2.1k
views
Comment:
C: Whole exomes: comparative analysis
7.2 years ago by
bioinfo8
▴ 230
0
votes
0
replies
2.3k
views
Comment:
C: Whole exomes: Rsamtools, RAM issue
7.2 years ago by
bioinfo8
▴ 230
8
votes
12
replies
2.1k
views
Whole exomes: comparative analysis
exome
R
whole exome
BAM
7.2 years ago by
bioinfo8
▴ 230
0
votes
1
reply
2.1k
views
Comment:
C: Whole exomes: number of genes, polymorphism
7.2 years ago by
bioinfo8
▴ 230
0
votes
0
replies
2.1k
views
Comment:
C: Whole exomes: number of genes, polymorphism
7.2 years ago by
bioinfo8
▴ 230
0
votes
1
reply
2.3k
views
Comment:
C: Whole exomes: Rsamtools, RAM issue
7.2 years ago by
bioinfo8
▴ 230
0
votes
1
reply
2.3k
views
Comment:
C: Whole exomes: Rsamtools, RAM issue
7.2 years ago by
bioinfo8
▴ 230
0
votes
7
replies
2.3k
views
Whole exomes: Rsamtools, RAM issue
R
Rsamtools
whole exome
RAM
BAM
7.2 years ago by
bioinfo8
▴ 230
0
votes
0
replies
2.1k
views
Comment:
C: Whole exomes: number of genes, polymorphism
7.2 years ago by
bioinfo8
▴ 230
0
votes
1
reply
2.1k
views
Comment:
C: Whole exomes: number of genes, polymorphism
7.2 years ago by
bioinfo8
▴ 230
0
votes
1
reply
241k
views
Comment:
C: Tools To Calculate Average Coverage For A Bam File?
7.3 years ago by
bioinfo8
▴ 230
0
votes
0
replies
25k
views
Comment:
C: Any Tools To Identify Significantly Altered Pathways?
7.4 years ago by
bioinfo8
▴ 230
2
votes
5
replies
3.1k
views
Character matrix to Numeric matrix for heatmap
RNA-Seq
R
next-gen
sleuth
7.4 years ago by
bioinfo8
▴ 230
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