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marongiu.luigi • 380
Status: New
Handle: @marongiu.luigi22078
Reputation: 380
Email: m*********@gmail.com
Joined: 12 months ago
Last seen: 12 months ago
Location: Germany, Mannheim, UMM

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C: Realign BAM files to other reference file
12 months ago
marongiu.luigi • 380
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1
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1.4k
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C: Realign BAM files to other reference file
12 months ago
marongiu.luigi • 380
3
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5
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154
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Retrieve family data using blastn command line
blast family name genomes
14 months ago
marongiu.luigi • 380 • updated 14 months ago
genomax 68k
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1
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154
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C: Retrieve family data using blastn command line
14 months ago
marongiu.luigi • 380
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1.1k
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C: remote blast requires installation of taxdb database
14 months ago
marongiu.luigi • 380
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1.1k
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C: remote blast requires installation of taxdb database
14 months ago
marongiu.luigi • 380
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342
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C: Oases Makefile:114: recipe for target 'obj/oases.o' failed
15 months ago
marongiu.luigi • 380
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342
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C: Oases Makefile:114: recipe for target 'obj/oases.o' failed
15 months ago
marongiu.luigi • 380
5
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14
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342
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Oases Makefile:114: recipe for target 'obj/oases.o' failed
software error installation De novo assembly
15 months ago
marongiu.luigi • 380 • updated 15 months ago
h.mon 25k
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158
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C: How to define several regions in GFF3 file?
15 months ago
marongiu.luigi • 380
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1
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342
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C: Oases Makefile:114: recipe for target 'obj/oases.o' failed
15 months ago
marongiu.luigi • 380
3
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2
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158
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How to define several regions in GFF3 file?
GFF3 conversion user genome
15 months ago
marongiu.luigi • 380
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342
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C: Oases Makefile:114: recipe for target 'obj/oases.o' failed
15 months ago
marongiu.luigi • 380
0
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1
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342
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C: Oases Makefile:114: recipe for target 'obj/oases.o' failed
15 months ago
marongiu.luigi • 380
0
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176
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C: Align to a reversed genome
16 months ago
marongiu.luigi • 380
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176
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C: Align to a reversed genome
16 months ago
marongiu.luigi • 380
5
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4
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176
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Align to a reversed genome
alignment genome
16 months ago
marongiu.luigi • 380
5
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10
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471
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how to run freebayes in multi-thread
VCF freebayes multi-thread
16 months ago
marongiu.luigi • 380 • updated 16 months ago
RamRS 21k
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471
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A: how to run freebayes in multi-thread
16 months ago
marongiu.luigi • 380
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1
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471
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C: how to run freebayes in multi-thread
16 months ago
marongiu.luigi • 380
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471
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C: how to run freebayes in multi-thread
16 months ago
marongiu.luigi • 380
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471
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C: how to run freebayes in multi-thread
16 months ago
marongiu.luigi • 380
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1
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471
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C: how to run freebayes in multi-thread
16 months ago
marongiu.luigi • 380
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1.1k
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C: install Primer3 on Ubuntu
17 months ago
marongiu.luigi • 380
5
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13
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1.1k
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install Primer3 on Ubuntu
software error
2.3 years ago
marongiu.luigi • 380 • updated 17 months ago
ricardo3889 • 20
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378
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C: Failure in alignment with BWA using fusion reference genome
18 months ago
marongiu.luigi • 380
0
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1
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378
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C: Failure in alignment with BWA using fusion reference genome
18 months ago
marongiu.luigi • 380
0
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1
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378
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C: Failure in alignment with BWA using fusion reference genome
18 months ago
marongiu.luigi • 380
0
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0
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378
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C: Failure in alignment with BWA using fusion reference genome
18 months ago
marongiu.luigi • 380
0
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1
Reply
378
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C: Failure in alignment with BWA using fusion reference genome
19 months ago
marongiu.luigi • 380 • updated 19 months ago
finswimmer 11k
0
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1
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378
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C: Failure in alignment with BWA using fusion reference genome
19 months ago
marongiu.luigi • 380
0
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1
Reply
378
Views
C: Failure in alignment with BWA using fusion reference genome
19 months ago
marongiu.luigi • 380
0
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1
Reply
378
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C: Failure in alignment with BWA using fusion reference genome
19 months ago
marongiu.luigi • 380
0
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4
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383
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How to interpret a read hit with IGV?
alignment IGV mapping interpretation
20 months ago
marongiu.luigi • 380 • updated 19 months ago
Biostar 20
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491
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C: Hidden reads in IGV
19 months ago
marongiu.luigi • 380
0
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1
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378
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C: Failure in alignment with BWA using fusion reference genome
19 months ago
marongiu.luigi • 380
0
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410
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C: convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to
19 months ago
marongiu.luigi • 380
0
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0
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378
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C: Failure in alignment with BWA using fusion reference genome
19 months ago
marongiu.luigi • 380
6
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17
Replies
378
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Failure in alignment with BWA using fusion reference genome
alignment software error
19 months ago
marongiu.luigi • 380
0
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1
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328
Views
C: Is is possible to use blastn to search on remote database from terminal?
19 months ago
marongiu.luigi • 380
0
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1
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328
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C: Is is possible to use blastn to search on remote database from terminal?
19 months ago
marongiu.luigi • 380
2
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7
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328
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Is is possible to use blastn to search on remote database from terminal?
database blast remote access
19 months ago
marongiu.luigi • 380 • updated 19 months ago
Santosh Anand 4.8k
9
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2
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331
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Heading format for GRCh38 reference file.
genome alignment fasta header
19 months ago
marongiu.luigi • 380 • updated 19 months ago
ATpoint 17k
0
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1
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410
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C: convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to
19 months ago
marongiu.luigi • 380
0
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1
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410
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C: convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to
19 months ago
marongiu.luigi • 380
0
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1
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410
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C: convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to
19 months ago
marongiu.luigi • 380
0
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410
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C: convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to
19 months ago
marongiu.luigi • 380
0
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1
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410
Views
C: convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to
19 months ago
marongiu.luigi • 380
0
Votes
1
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410
Views
C: convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to
19 months ago
marongiu.luigi • 380
0
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0
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410
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C: convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to
19 months ago
marongiu.luigi • 380
0
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2
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410
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C: convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to
19 months ago
marongiu.luigi • 380
4
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20
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410
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convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to_fasta
fasta fastq conversion EMBOSS FASTX
19 months ago
marongiu.luigi • 380 • updated 19 months ago
finswimmer 11k
0
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1
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410
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C: convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to
19 months ago
marongiu.luigi • 380
0
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0
Replies
491
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C: Hidden reads in IGV
19 months ago
marongiu.luigi • 380
0
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1
Reply
491
Views
C: Hidden reads in IGV
19 months ago
marongiu.luigi • 380
0
Votes
1
Reply
491
Views
C: Hidden reads in IGV
19 months ago
marongiu.luigi • 380
4
Votes
12
Replies
491
Views
Hidden reads in IGV
mapping IGV visualization read quality
19 months ago
marongiu.luigi • 380 • updated 19 months ago
Santosh Anand 4.8k
0
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0
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383
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C: How to interpret a read hit with IGV?
19 months ago
marongiu.luigi • 380
0
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1
Reply
383
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C: How to interpret a read hit with IGV?
20 months ago
marongiu.luigi • 380
0
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293
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C: What sequence has being read by IGV's 'copy sequence'
20 months ago
marongiu.luigi • 380
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293
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C: What sequence has being read by IGV's 'copy sequence'
20 months ago
marongiu.luigi • 380
2
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4
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293
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What sequence has being read by IGV's 'copy sequence'
alignment samtools igv read map coverage
20 months ago
marongiu.luigi • 380 • updated 20 months ago
h.mon 25k
0
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0
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490
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C: GATK BaseRecalibrator No overlapping contigs found ERROR
20 months ago
marongiu.luigi • 380
2
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2
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490
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GATK BaseRecalibrator No overlapping contigs found ERROR
gatk baseRecalibrator contigs reads
20 months ago
marongiu.luigi • 380 • updated 20 months ago
Pierre Lindenbaum 120k
0
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1
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480
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C: Install vcf2bed plugin for bcftools
21 months ago
marongiu.luigi • 380
0
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0
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480
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C: Install vcf2bed plugin for bcftools
21 months ago
marongiu.luigi • 380
1
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5
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480
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Install vcf2bed plugin for bcftools
vcf2bed bcftools installation
21 months ago
marongiu.luigi • 380 • updated 21 months ago
John Marshall ♦ 1.5k
4
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2
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290
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navigate IGV to the points of interest
IGV mapping visualization
21 months ago
marongiu.luigi • 380 • updated 21 months ago
toralmanvar • 760
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626
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C: Calculate CDS phase in gff3 format
21 months ago
marongiu.luigi • 380
0
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553
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C: convert fasta/gb to vcf
21 months ago
marongiu.luigi • 380
0
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1
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553
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C: convert fasta/gb to vcf
21 months ago
marongiu.luigi • 380
0
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1
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553
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C: convert fasta/gb to vcf
21 months ago
marongiu.luigi • 380
0
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2
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553
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C: convert fasta/gb to vcf
21 months ago
marongiu.luigi • 380
7
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14
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553
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convert fasta/gb to vcf
vcf reference file conversion
21 months ago
marongiu.luigi • 380
1
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0
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900
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C: IncompatibleClassChangeError when running gatk BaseRecalibrator
21 months ago
marongiu.luigi • 380
1
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5
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900
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IncompatibleClassChangeError when running gatk BaseRecalibrator
GATK BaseRecalibrator java
21 months ago
marongiu.luigi • 380
0
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1
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494
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C: Finding protein- encoding genes in a sequence
21 months ago
marongiu.luigi • 380
1
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2
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494
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A: Finding protein- encoding genes in a sequence
21 months ago
marongiu.luigi • 380
0
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0
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900
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C: IncompatibleClassChangeError when running gatk BaseRecalibrator
21 months ago
marongiu.luigi • 380
0
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1
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7.9k
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C: vcf not indexing
21 months ago
marongiu.luigi • 380
2
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2
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365
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How to choose correct VCF for Human reference genome?
alignment genome VCF
21 months ago
marongiu.luigi • 380
0
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0
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1.4k
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C: Realign BAM files to other reference file
21 months ago
marongiu.luigi • 380
0
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1
Reply
1.4k
Views
C: Realign BAM files to other reference file
21 months ago
marongiu.luigi • 380
0
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0
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1.1k
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C: Memory use in indexing
21 months ago
marongiu.luigi • 380
0
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1
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996
Views
C: GATK 4 GenomeAnalysisTK still available? (Unable to access jarfile)
21 months ago
marongiu.luigi • 380
1
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8
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996
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GATK 4 GenomeAnalysisTK still available? (Unable to access jarfile)
GATK GenomeAnalysisTK versions
21 months ago
marongiu.luigi • 380
0
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0
Replies
996
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C: GATK 4 GenomeAnalysisTK still available? (Unable to access jarfile)
21 months ago
marongiu.luigi • 380
0
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1
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996
Views
C: GATK 4 GenomeAnalysisTK still available? (Unable to access jarfile)
21 months ago
marongiu.luigi • 380
0
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1
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502
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C: EMBOSS transeq translate to protein with 3 letter code
21 months ago
marongiu.luigi • 380
0
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1
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502
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C: EMBOSS transeq translate to protein with 3 letter code
21 months ago
marongiu.luigi • 380
0
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0
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502
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C: EMBOSS transeq translate to protein with 3 letter code
21 months ago
marongiu.luigi • 380
1
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2
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502
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C: EMBOSS transeq translate to protein with 3 letter code
21 months ago
marongiu.luigi • 380
6
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11
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502
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EMBOSS transeq translate to protein with 3 letter code
emboss transeq translation 3 letter code
21 months ago
marongiu.luigi • 380
0
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0
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618
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C: design PCR primers with primer3 on command line
21 months ago
marongiu.luigi • 380
0
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1
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618
Views
C: design PCR primers with primer3 on command line
21 months ago
marongiu.luigi • 380
0
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1
Reply
618
Views
C: design PCR primers with primer3 on command line
21 months ago
marongiu.luigi • 380
2
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5
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618
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design PCR primers with primer3 on command line
pcr primer3 command line
21 months ago
marongiu.luigi • 380
1
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1
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324
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A: sambamba-markdup: unable to move file pointer
21 months ago
marongiu.luigi • 380
1
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2
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324
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sambamba-markdup: unable to move file pointer
sambamba software error file pointer
21 months ago
marongiu.luigi • 380
0
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0
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489
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C: Picard ERROR:INVALID_VERSION_NUMBER of sorted BAM file
21 months ago
marongiu.luigi • 380
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