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marongiu.luigi • 380
Status: New
Handle: @marongiu.luigi22078
Reputation: 380
Email: m*********@gmail.com
Joined: 16 months ago
Last seen: 16 months ago
Location: Germany, Mannheim, UMM

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0
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Comment: C: Realign BAM files to other reference file
16 months ago
marongiu.luigi • 380
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1
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1.4k
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Comment: C: Realign BAM files to other reference file
16 months ago
marongiu.luigi • 380
3
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161
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Retrieve family data using blastn command line
blast family name genomes
17 months ago
marongiu.luigi • 380 • updated 17 months ago
genomax 68k
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1
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161
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Comment: C: Retrieve family data using blastn command line
17 months ago
marongiu.luigi • 380
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1.1k
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Comment: C: remote blast requires installation of taxdb database
17 months ago
marongiu.luigi • 380
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1.1k
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Comment: C: remote blast requires installation of taxdb database
18 months ago
marongiu.luigi • 380
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346
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Comment: C: Oases Makefile:114: recipe for target 'obj/oases.o' failed
18 months ago
marongiu.luigi • 380
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346
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Comment: C: Oases Makefile:114: recipe for target 'obj/oases.o' failed
18 months ago
marongiu.luigi • 380
5
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14
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Oases Makefile:114: recipe for target 'obj/oases.o' failed
software error installation De novo assembly
18 months ago
marongiu.luigi • 380 • updated 18 months ago
h.mon 25k
0
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164
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Comment: C: How to define several regions in GFF3 file?
18 months ago
marongiu.luigi • 380
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346
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Comment: C: Oases Makefile:114: recipe for target 'obj/oases.o' failed
18 months ago
marongiu.luigi • 380
3
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2
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164
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How to define several regions in GFF3 file?
GFF3 conversion user genome
18 months ago
marongiu.luigi • 380
0
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346
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Comment: C: Oases Makefile:114: recipe for target 'obj/oases.o' failed
18 months ago
marongiu.luigi • 380
0
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1
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346
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Comment: C: Oases Makefile:114: recipe for target 'obj/oases.o' failed
18 months ago
marongiu.luigi • 380
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178
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Comment: C: Align to a reversed genome
20 months ago
marongiu.luigi • 380
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178
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Comment: C: Align to a reversed genome
20 months ago
marongiu.luigi • 380
5
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178
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Align to a reversed genome
alignment genome
20 months ago
marongiu.luigi • 380
5
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10
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476
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how to run freebayes in multi-thread
VCF freebayes multi-thread
20 months ago
marongiu.luigi • 380 • updated 20 months ago
RamRS 21k
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476
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Comment: A: how to run freebayes in multi-thread
20 months ago
marongiu.luigi • 380
0
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476
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Comment: C: how to run freebayes in multi-thread
20 months ago
marongiu.luigi • 380
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476
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Comment: C: how to run freebayes in multi-thread
20 months ago
marongiu.luigi • 380
0
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476
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Comment: C: how to run freebayes in multi-thread
20 months ago
marongiu.luigi • 380
0
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1
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476
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Comment: C: how to run freebayes in multi-thread
20 months ago
marongiu.luigi • 380
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1.1k
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Comment: C: install Primer3 on Ubuntu
21 months ago
marongiu.luigi • 380
5
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1.1k
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install Primer3 on Ubuntu
software error
2.6 years ago
marongiu.luigi • 380 • updated 21 months ago
ricardo3889 • 20
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381
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Comment: C: Failure in alignment with BWA using fusion reference genome
22 months ago
marongiu.luigi • 380
0
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1
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381
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Comment: C: Failure in alignment with BWA using fusion reference genome
22 months ago
marongiu.luigi • 380
0
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1
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381
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Comment: C: Failure in alignment with BWA using fusion reference genome
22 months ago
marongiu.luigi • 380
0
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381
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Comment: C: Failure in alignment with BWA using fusion reference genome
22 months ago
marongiu.luigi • 380
0
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1
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381
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Comment: C: Failure in alignment with BWA using fusion reference genome
22 months ago
marongiu.luigi • 380 • updated 22 months ago
finswimmer 11k
0
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1
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381
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Comment: C: Failure in alignment with BWA using fusion reference genome
22 months ago
marongiu.luigi • 380
0
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1
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381
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Comment: C: Failure in alignment with BWA using fusion reference genome
23 months ago
marongiu.luigi • 380
0
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1
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381
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Comment: C: Failure in alignment with BWA using fusion reference genome
23 months ago
marongiu.luigi • 380
0
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4
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385
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How to interpret a read hit with IGV?
alignment IGV mapping interpretation
24 months ago
marongiu.luigi • 380 • updated 23 months ago
Biostar 20
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496
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Comment: C: Hidden reads in IGV
23 months ago
marongiu.luigi • 380
0
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1
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381
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Comment: C: Failure in alignment with BWA using fusion reference genome
23 months ago
marongiu.luigi • 380
0
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413
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Comment: C: convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to
23 months ago
marongiu.luigi • 380
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381
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Comment: C: Failure in alignment with BWA using fusion reference genome
23 months ago
marongiu.luigi • 380
6
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17
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381
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Failure in alignment with BWA using fusion reference genome
alignment software error
23 months ago
marongiu.luigi • 380
0
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1
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331
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Comment: C: Is is possible to use blastn to search on remote database from terminal?
23 months ago
marongiu.luigi • 380
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1
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331
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Comment: C: Is is possible to use blastn to search on remote database from terminal?
23 months ago
marongiu.luigi • 380
2
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7
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331
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Is is possible to use blastn to search on remote database from terminal?
database blast remote access
23 months ago
marongiu.luigi • 380 • updated 23 months ago
Santosh Anand 4.8k
9
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2
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335
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Heading format for GRCh38 reference file.
genome alignment fasta header
23 months ago
marongiu.luigi • 380 • updated 23 months ago
ATpoint 17k
0
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1
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413
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Comment: C: convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to
23 months ago
marongiu.luigi • 380
0
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1
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413
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Comment: C: convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to
23 months ago
marongiu.luigi • 380
0
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1
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413
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Comment: C: convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to
23 months ago
marongiu.luigi • 380
0
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413
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Comment: C: convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to
23 months ago
marongiu.luigi • 380
0
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1
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413
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Comment: C: convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to
23 months ago
marongiu.luigi • 380
0
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1
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413
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Comment: C: convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to
23 months ago
marongiu.luigi • 380
0
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413
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Comment: C: convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to
23 months ago
marongiu.luigi • 380
0
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2
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413
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Comment: C: convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to
23 months ago
marongiu.luigi • 380
4
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20
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413
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convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to_fasta
fasta fastq conversion EMBOSS FASTX
23 months ago
marongiu.luigi • 380 • updated 23 months ago
finswimmer 11k
0
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1
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413
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Comment: C: convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to
23 months ago
marongiu.luigi • 380
0
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0
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496
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Comment: C: Hidden reads in IGV
23 months ago
marongiu.luigi • 380
0
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1
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496
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Comment: C: Hidden reads in IGV
23 months ago
marongiu.luigi • 380
0
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1
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496
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Comment: C: Hidden reads in IGV
23 months ago
marongiu.luigi • 380
4
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12
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496
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Hidden reads in IGV
mapping IGV visualization read quality
23 months ago
marongiu.luigi • 380 • updated 23 months ago
Santosh Anand 4.8k
0
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0
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385
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Comment: C: How to interpret a read hit with IGV?
23 months ago
marongiu.luigi • 380
0
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1
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385
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Comment: C: How to interpret a read hit with IGV?
24 months ago
marongiu.luigi • 380
0
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0
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295
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Comment: C: What sequence has being read by IGV's 'copy sequence'
24 months ago
marongiu.luigi • 380
0
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295
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Comment: C: What sequence has being read by IGV's 'copy sequence'
24 months ago
marongiu.luigi • 380
2
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4
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295
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What sequence has being read by IGV's 'copy sequence'
alignment samtools igv read map coverage
2.0 years ago
marongiu.luigi • 380 • updated 2.0 years ago
h.mon 25k
0
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0
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495
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Comment: C: GATK BaseRecalibrator No overlapping contigs found ERROR
2.0 years ago
marongiu.luigi • 380
2
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2
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495
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GATK BaseRecalibrator No overlapping contigs found ERROR
gatk baseRecalibrator contigs reads
2.0 years ago
marongiu.luigi • 380 • updated 2.0 years ago
Pierre Lindenbaum 120k
0
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1
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484
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Comment: C: Install vcf2bed plugin for bcftools
2.1 years ago
marongiu.luigi • 380
0
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484
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Comment: C: Install vcf2bed plugin for bcftools
2.1 years ago
marongiu.luigi • 380
1
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5
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484
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Install vcf2bed plugin for bcftools
vcf2bed bcftools installation
2.1 years ago
marongiu.luigi • 380 • updated 2.1 years ago
John Marshall ♦ 1.5k
4
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2
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293
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navigate IGV to the points of interest
IGV mapping visualization
2.1 years ago
marongiu.luigi • 380 • updated 2.1 years ago
toralmanvar • 760
0
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0
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629
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Comment: C: Calculate CDS phase in gff3 format
2.1 years ago
marongiu.luigi • 380
0
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556
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Comment: C: convert fasta/gb to vcf
2.1 years ago
marongiu.luigi • 380
0
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1
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556
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Comment: C: convert fasta/gb to vcf
2.1 years ago
marongiu.luigi • 380
0
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1
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556
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Comment: C: convert fasta/gb to vcf
2.1 years ago
marongiu.luigi • 380
0
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2
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556
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Comment: C: convert fasta/gb to vcf
2.1 years ago
marongiu.luigi • 380
7
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14
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556
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convert fasta/gb to vcf
vcf reference file conversion
2.1 years ago
marongiu.luigi • 380
1
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0
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904
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Comment: C: IncompatibleClassChangeError when running gatk BaseRecalibrator
2.1 years ago
marongiu.luigi • 380
1
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5
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904
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IncompatibleClassChangeError when running gatk BaseRecalibrator
GATK BaseRecalibrator java
2.1 years ago
marongiu.luigi • 380
0
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1
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499
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Comment: C: Finding protein- encoding genes in a sequence
2.1 years ago
marongiu.luigi • 380
1
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2
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499
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Answer: A: Finding protein- encoding genes in a sequence
2.1 years ago
marongiu.luigi • 380
0
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0
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904
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Comment: C: IncompatibleClassChangeError when running gatk BaseRecalibrator
2.1 years ago
marongiu.luigi • 380
0
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1
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7.9k
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Comment: C: vcf not indexing
2.1 years ago
marongiu.luigi • 380
2
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2
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367
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How to choose correct VCF for Human reference genome?
alignment genome VCF
2.1 years ago
marongiu.luigi • 380
0
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0
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1.4k
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Comment: C: Realign BAM files to other reference file
2.1 years ago
marongiu.luigi • 380
0
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1
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1.4k
Views
Comment: C: Realign BAM files to other reference file
2.1 years ago
marongiu.luigi • 380
0
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0
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1.1k
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Comment: C: Memory use in indexing
2.1 years ago
marongiu.luigi • 380
0
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1
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999
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Comment: C: GATK 4 GenomeAnalysisTK still available? (Unable to access jarfile)
2.1 years ago
marongiu.luigi • 380
1
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8
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999
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GATK 4 GenomeAnalysisTK still available? (Unable to access jarfile)
GATK GenomeAnalysisTK versions
2.1 years ago
marongiu.luigi • 380
0
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0
Replies
999
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Comment: C: GATK 4 GenomeAnalysisTK still available? (Unable to access jarfile)
2.1 years ago
marongiu.luigi • 380
0
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1
Reply
999
Views
Comment: C: GATK 4 GenomeAnalysisTK still available? (Unable to access jarfile)
2.1 years ago
marongiu.luigi • 380
0
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1
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508
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Comment: C: EMBOSS transeq translate to protein with 3 letter code
2.1 years ago
marongiu.luigi • 380
0
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1
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508
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Comment: C: EMBOSS transeq translate to protein with 3 letter code
2.1 years ago
marongiu.luigi • 380
0
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0
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508
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Comment: C: EMBOSS transeq translate to protein with 3 letter code
2.1 years ago
marongiu.luigi • 380
1
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2
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508
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Comment: C: EMBOSS transeq translate to protein with 3 letter code
2.1 years ago
marongiu.luigi • 380
6
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11
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508
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EMBOSS transeq translate to protein with 3 letter code
emboss transeq translation 3 letter code
2.1 years ago
marongiu.luigi • 380
0
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0
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623
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Comment: C: design PCR primers with primer3 on command line
2.1 years ago
marongiu.luigi • 380
0
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1
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623
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Comment: C: design PCR primers with primer3 on command line
2.1 years ago
marongiu.luigi • 380
0
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1
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623
Views
Comment: C: design PCR primers with primer3 on command line
2.1 years ago
marongiu.luigi • 380
2
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5
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623
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design PCR primers with primer3 on command line
pcr primer3 command line
2.1 years ago
marongiu.luigi • 380
1
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1
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327
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Answer: A: sambamba-markdup: unable to move file pointer
2.1 years ago
marongiu.luigi • 380
1
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2
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327
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sambamba-markdup: unable to move file pointer
sambamba software error file pointer
2.1 years ago
marongiu.luigi • 380
0
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0
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494
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Comment: C: Picard ERROR:INVALID_VERSION_NUMBER of sorted BAM file
2.1 years ago
marongiu.luigi • 380
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