Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
2
votes
2
replies
2.1k
views
Tutorial: Human mitochondrial DNA annotation in SnpEff
chrMT SNP snpEff
updated 14 months ago by 44k • written 3.9 years ago by 3.2k
0
votes
1
reply
2.4k
views
Comment: C: Software for metadata management, alternative to Excel
3.9 years ago by Arup Ghosh 3.2k
1
vote
0
replies
3.5k
views
Answer: C: conda install homer
4.0 years ago by Arup Ghosh 3.2k
0
votes
1
reply
47k
views
Comment: C: Fast download of FASTQ files from the European Nucleotide Archive (ENA)
4.0 years ago by Arup Ghosh 3.2k
0
votes
0
replies
1.1k
views
Comment: C: Error downloading streams from SRA-ncbi when running fastq-dump
4.0 years ago by Arup Ghosh 3.2k
2
votes
1
reply
2.7k
views
Answer: A: updating SNP names in VCF file
4.0 years ago by Arup Ghosh 3.2k
2
votes
1
reply
2.2k
views
Answer: C: Simple explanation and usage of WGCNA package?
4.0 years ago by Arup Ghosh 3.2k
0
votes
0
replies
760
views
Comment: C: Finding enhancers of the whole human body
4.0 years ago by Arup Ghosh 3.2k
0
votes
1
reply
800
views
Comment: C: SnpEff with files from 1001 genomes (sequences from Arabidopsis thaliana).
4.0 years ago by Arup Ghosh 3.2k
1
vote
1
reply
1.0k
views
Answer: C: Whole-genome human-mouse syntenic block tracks/database
4.0 years ago by Arup Ghosh 3.2k
1
vote
1
reply
2.3k
views
Answer: C: Drawing KEGG-type metabolic pathways
4.0 years ago by Arup Ghosh 3.2k
5
votes
0
replies
8.0k
views
Answer: C: GATK 3.8 and GATK 3.7 scripts
4.1 years ago by Arup Ghosh 3.2k
0
votes
1
reply
1.3k
views
Comment: C: Bowtie2 aligning output
4.1 years ago by Arup Ghosh 3.2k
0
votes
1
reply
1.3k
views
Comment: C: Bowtie2 aligning output
4.1 years ago by Arup Ghosh 3.2k
0
votes
1
reply
1.0k
views
Comment: C: gene expression data of scRNA-Seq
4.1 years ago by Arup Ghosh 3.2k
0
votes
1
reply
1.0k
views
Comment: C: gene expression data of scRNA-Seq
4.1 years ago by Arup Ghosh 3.2k
0
votes
0
replies
4.8k
views
Comment: C: Error in GATK GenomicsDBImport
4.1 years ago by Arup Ghosh 3.2k
0
votes
0
replies
1.6k
views
Comment: C: How to host/run Galaxyserver-NGS in AWS IP or in a webserver IP
4.1 years ago by Arup Ghosh 3.2k
0
votes
1
reply
1.6k
views
Comment: C: How to host/run Galaxyserver-NGS in AWS IP or in a webserver IP
4.1 years ago by Arup Ghosh 3.2k
0
votes
1
reply
1.6k
views
Comment: C: How to host/run Galaxyserver-NGS in AWS IP or in a webserver IP
4.1 years ago by Arup Ghosh 3.2k
0
votes
0
replies
2.2k
views
Comment: C: Local non-kart file has 0 unresolved dependencies?
4.1 years ago by Arup Ghosh 3.2k
0
votes
1
reply
2.2k
views
Answer: C: Add gene name in ComplexHeatmap
4.1 years ago by Arup Ghosh 3.2k
1
vote
0
replies
9.2k
views
Comment: C: fastest UMAP method
4.1 years ago by Arup Ghosh 3.2k
1
vote
0
replies
1.1k
views
Comment: C: Question about COVID19 data sets
4.1 years ago by Arup Ghosh 3.2k
0
votes
1
reply
1.1k
views
Comment: C: Question about COVID19 data sets
4.1 years ago by Arup Ghosh 3.2k
0
votes
0
replies
813
views
Comment: C: Establishing connection and credential info for miRBase?
4.1 years ago by Arup Ghosh 3.2k
0
votes
0
replies
2.0k
views
Comment: C: Average depth/coverage before and after PCR duplicates cleanup
4.2 years ago by Arup Ghosh 3.2k
1
vote
0
replies
1.3k
views
Comment: C: Canu installation, error with GCC compiler
4.2 years ago by Arup Ghosh 3.2k
0
votes
0
replies
839
views
Comment: C: SRA file identifiers for use with sra-toolkit
4.2 years ago by Arup Ghosh 3.2k
0
votes
1
reply
2.8k
views
Comment: C: Extract quality scores from aligned BAM files
4.2 years ago by Arup Ghosh 3.2k
1
vote
1
reply
3.7k
views
Comment: C: Combining VCF files using GATK
4.2 years ago by Arup Ghosh 3.2k
0
votes
1
reply
3.7k
views
Comment: C: Combining VCF files using GATK
4.2 years ago by Arup Ghosh 3.2k
0
votes
2
replies
2.6k
views
Comment: C: How are the log2 values in CNVkit .cnr files calculated?
4.2 years ago by Arup Ghosh 3.2k
6
votes
2
replies
20k
views
Answer: A: Conversion of Gene Name to Ensemble ID
4.2 years ago by Arup Ghosh 3.2k
0
votes
1
reply
2.7k
views
Answer: A: splitting test and train data
4.2 years ago by Arup Ghosh 3.2k
2
votes
2
replies
2.6k
views
Answer: C: Find a path to STAR
4.2 years ago by Arup Ghosh 3.2k
0
votes
0
replies
853
views
Comment: C: Using noisy error in centos
4.2 years ago by Arup Ghosh 3.2k
0
votes
0
replies
794
views
Comment: C: ChIP-seq reads for the human genome
4.2 years ago by Arup Ghosh 3.2k
2
votes
0
replies
1.1k
views
Answer: C: The number of reads from the BMA file is more than the number of reads from its
4.2 years ago by Arup Ghosh 3.2k
0
votes
0
replies
3.6k
views
Comment: C: mapIDs (AnnotationDBi) returns shorter list of IDs than input IDs
4.2 years ago by Arup Ghosh 3.2k
0
votes
0
replies
1.2k
views
Comment: C: Skipping Clustering in Seurat
4.2 years ago by Arup Ghosh 3.2k
0
votes
0
replies
4.7k
views
Answer: A: checksum on tar.gz
4.2 years ago by Arup Ghosh 3.2k
0
votes
0
replies
3.2k
views
Comment: C: Mpileup Multiple Samples - Individual Dp4 Values
4.2 years ago by Arup Ghosh 3.2k
3
votes
1
reply
3.6k
views
Answer: C: mapIDs (AnnotationDBi) returns shorter list of IDs than input IDs
4.2 years ago by Arup Ghosh 3.2k
0
votes
0
replies
803
views
Comment: C: HTSeq --nonunique all does not work
4.2 years ago by Arup Ghosh 3.2k
1
vote
0
replies
749
views
Comment: C: Error running htseq count files in deseq2
4.2 years ago by Arup Ghosh 3.2k
0
votes
0
replies
1.6k
views
Comment: C: HaplotypeCaller: java.lang.NullPointerException when multiple-line bed file is u
4.2 years ago by Arup Ghosh 3.2k
0
votes
2
replies
1.6k
views
Comment: C: HaplotypeCaller: java.lang.NullPointerException when multiple-line bed file is u
4.2 years ago by Arup Ghosh 3.2k
0
votes
2
replies
1.6k
views
Comment: C: HaplotypeCaller: java.lang.NullPointerException when multiple-line bed file is u
4.2 years ago by Arup Ghosh 3.2k
0
votes
0
replies
3.0k
views
Comment: C: Cluster using known marker genes (Seurat)
4.2 years ago by Arup Ghosh 3.2k
460 results • Page 4 of 10
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6