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sharmatina189059 • 30
Status: New
Handle: @sharmatina18905921479
Reputation: 30
Email: s*********@gmail.com
Joined: 17 months ago
Last seen: 17 months ago
Location: United States

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0
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80
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Pan-genome using BPGA
genome
17 months ago
sharmatina189059 • 30
0
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1
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686
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Pathway annotation using sequence alignment
alignment KEGG BLASTKOALA
3.1 years ago
sharmatina189059 • 30 • updated 18 months ago
Biostar 20
0
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0
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226
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Comment: C: Discriminating ortholog and paralogs using Cd-hit
21 months ago
sharmatina189059 • 30
1
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2
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226
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Discriminating ortholog and paralogs using Cd-hit
genome gene
21 months ago
sharmatina189059 • 30
0
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0
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130
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What does 16/304 MIC value mean?
Life sciences
22 months ago
sharmatina189059 • 30
0
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0
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179
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How to draw gene architecture of bacterial genome using specific coordinates?
genome
24 months ago
sharmatina189059 • 30
1
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7
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401
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Is there a tool for making a synteny blocks of a gene with its downstream and upstream genes using a bacterial genome sequence?
genome
2.0 years ago
sharmatina189059 • 30 • updated 2.0 years ago
Joseph Hughes ♦ 2.7k
0
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1
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401
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Comment: C: Is there a tool for making a synteny blocks of a gene with its downstream and up
2.0 years ago
sharmatina189059 • 30
2
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12
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432
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how to change fasta headers?
sequence
2.2 years ago
sharmatina189059 • 30 • updated 2.2 years ago
Hugo • 150
0
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1
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432
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Comment: C: how to change fasta headers?
2.2 years ago
sharmatina189059 • 30
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4
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432
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Comment: C: how to change fasta headers?
2.2 years ago
sharmatina189059 • 30 • updated 2.2 years ago
finswimmer 11k
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0
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432
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Comment: C: how to change fasta headers?
2.2 years ago
sharmatina189059 • 30
0
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0
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432
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Comment: C: how to change fasta headers?
2.2 years ago
sharmatina189059 • 30
0
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2
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486
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Comment: C: how to download all protein sequnces of a bacteria using ncbi ftp site?
2.2 years ago
sharmatina189059 • 30 • updated 2.2 years ago
Joe 12k
2
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6
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486
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how to download all protein sequnces of a bacteria using ncbi ftp site?
ncbi
2.2 years ago
sharmatina189059 • 30 • updated 2.2 years ago
Joe 12k
0
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1
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376
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How to use genewise using pubmed.mineR ?
R
2.2 years ago
sharmatina189059 • 30
0
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1
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345
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Comment: C: Row and coloumn names do not display on x and Y axis in heatmaply.
2.4 years ago
sharmatina189059 • 30
0
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1
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345
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Comment: C: Row and coloumn names do not display on x and Y axis in heatmaply.
2.4 years ago
sharmatina189059 • 30
0
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0
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345
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Comment: C: Row and coloumn names do not display on x and Y axis in heatmaply.
2.4 years ago
sharmatina189059 • 30
0
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2
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345
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Comment: C: Row and coloumn names do not display on x and Y axis in heatmaply.
2.4 years ago
sharmatina189059 • 30
0
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0
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345
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Comment: C: Row and coloumn names do not display on x and Y axis in heatmaply.
2.4 years ago
sharmatina189059 • 30
1
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11
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345
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Row and coloumn names do not display on x and Y axis in heatmaply.
heatmap
2.4 years ago
sharmatina189059 • 30 • updated 2.4 years ago
WouterDeCoster 39k
0
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1
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464
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Comment: C: Retrieve multi-line fasta sequences using list of locus tag
2.5 years ago
sharmatina189059 • 30
0
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1
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398
Views
How to calculate the mutation rate of a protein sequence of bacteria?
genome
2.5 years ago
sharmatina189059 • 30
0
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0
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356
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Comment: C: Compacted de-bruijn graph
2.5 years ago
sharmatina189059 • 30
0
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3
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356
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Compacted de-bruijn graph
assembly
2.5 years ago
sharmatina189059 • 30 • updated 2.5 years ago
Vijay Lakhujani 4.1k
4
Votes
8
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464
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Retrieve multi-line fasta sequences using list of locus tag
sequence
2.5 years ago
sharmatina189059 • 30 • updated 2.5 years ago
Hugo • 150
0
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6
Replies
465
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What is the difference between complete genome and chromosome at NCBI? Why these two terms have been mentioned differently?
NCBI
2.5 years ago
sharmatina189059 • 30
0
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0
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465
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Comment: A: What is the difference between complete genome and chromosome at NCBI? Why these
2.5 years ago
sharmatina189059 • 30
0
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0
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465
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Comment: C: What is the difference between complete genome and chromosome at NCBI? Why these
2.5 years ago
sharmatina189059 • 30
4
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6
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557
Views
Query regarding RCSBPDB
RCSB-PDB
3.1 years ago
sharmatina189059 • 30 • updated 2.6 years ago
cc • 20
0
Votes
2
Replies
466
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STRING database threshold value
genome STRING database
2.8 years ago
sharmatina189059 • 30 • updated 2.6 years ago
Biostar 20
0
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0
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466
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Comment: C: STRING database threshold value
2.8 years ago
sharmatina189059 • 30
0
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0
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395
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Comment: C: Why one genbank entry has multiple CDS?
2.8 years ago
sharmatina189059 • 30
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2
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395
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Why one genbank entry has multiple CDS?
genome
2.8 years ago
sharmatina189059 • 30 • updated 2.8 years ago
Asaf 5.6k
0
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1
Reply
1.1k
Views
Working with PPI using STRING database
string database R
2.9 years ago
sharmatina189059 • 30
1
Vote
3
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756
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Query regarding BLASTKOALA (KEGG) for pathway annotation
BLASTKOALA Pathway annotation
3.1 years ago
sharmatina189059 • 30 • updated 2.9 years ago
natasha.sernova ♦ 3.5k
3
Votes
4
Replies
1.8k
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creating a heatmap with R and retrieve cluster data from dendogram
R
3.0 years ago
sharmatina189059 • 30 • updated 3.0 years ago
EagleEye 6.4k
0
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0
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1.8k
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Comment: C: creating a heatmap with R and retrieve cluster data from dendogram
3.0 years ago
sharmatina189059 • 30
0
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0
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457
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Retrieving biochemical reaction using a list of EC numbers .
EC numbers bacterial genome annotation
3.0 years ago
sharmatina189059 • 30
0
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0
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1.1k
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Comment: C: Retrieving Reactions from EC number in BiGG Model
3.0 years ago
sharmatina189059 • 30
0
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0
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483
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Comment: C: EC file parsing
3.0 years ago
sharmatina189059 • 30
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0
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483
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Comment: C: EC file parsing
3.0 years ago
sharmatina189059 • 30
0
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0
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483
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Answer: A: EC file parsing
3.0 years ago
sharmatina189059 • 30
2
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12
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483
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EC file parsing
File parsing
3.0 years ago
sharmatina189059 • 30
0
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0
Replies
483
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Comment: C: EC file parsing
3.0 years ago
sharmatina189059 • 30
0
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1
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483
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Comment: C: EC file parsing
3.1 years ago
sharmatina189059 • 30 • updated 3.1 years ago
WouterDeCoster 39k
0
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1
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483
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Comment: C: EC file parsing
3.1 years ago
sharmatina189059 • 30
0
Votes
1
Reply
520
Views
Query to retrieve pathway data of an organism using BioCyc
Biocyc API Data mining
3.1 years ago
sharmatina189059 • 30 • updated 3.1 years ago
Biostar 20
0
Votes
1
Reply
629
Views
Comment: C: KEGG data parse
3.1 years ago
sharmatina189059 • 30
0
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0
Replies
629
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Comment: C: KEGG data parse
3.1 years ago
sharmatina189059 • 30
0
Votes
0
Replies
692
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Comment: C: Retrieve data from Excel sheet for Mysql table
3.1 years ago
sharmatina189059 • 30 • updated 3.1 years ago
genomax 68k
0
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0
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692
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Comment: C: Retrieve data from Excel sheet for Mysql table
3.1 years ago
sharmatina189059 • 30
2
Votes
8
Replies
692
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Retrieve data from Excel sheet for Mysql table
MySQL Excel Perl PHP
3.1 years ago
sharmatina189059 • 30 • updated 3.1 years ago
genomax 68k
0
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1
Reply
692
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Comment: C: Retrieve data from Excel sheet for Mysql table
3.1 years ago
sharmatina189059 • 30
0
Votes
0
Replies
814
Views
Pathway annotation using KEGG
KEGG
3.1 years ago
sharmatina189059 • 30
0
Votes
1
Reply
2.0k
Views
Comment: C: GeneSCF (Gene Enrichment Tool): Advice to users
3.1 years ago
sharmatina189059 • 30
0
Votes
1
Reply
629
Views
Comment: C: KEGG data parse
3.1 years ago
sharmatina189059 • 30
0
Votes
1
Reply
629
Views
Comment: C: KEGG data parse
3.1 years ago
sharmatina189059 • 30
0
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0
Replies
626
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KEGG BLASTKOALA parameters
BLASTKOALA
3.1 years ago
sharmatina189059 • 30
0
Votes
1
Reply
598
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Query regarding KEGG database
KEGG Interacting pathways
3.1 years ago
sharmatina189059 • 30
6
Votes
9
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629
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KEGG data parse
R data parsing
3.1 years ago
sharmatina189059 • 30 • updated 3.1 years ago
Paul ♦ 1.3k
2
Votes
2
Replies
695
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problem in fetching data using excel
genome KEGG data
3.1 years ago
sharmatina189059 • 30 • updated 3.1 years ago
george.ry ♦ 1.1k
0
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1
Reply
732
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Comment: C: KEGG database query
3.1 years ago
sharmatina189059 • 30
0
Votes
0
Replies
732
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Comment: C: KEGG database query
3.1 years ago
sharmatina189059 • 30
0
Votes
2
Replies
732
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Comment: C: KEGG database query
3.1 years ago
sharmatina189059 • 30
1
Vote
6
Replies
732
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KEGG database query
KEGG database query
3.1 years ago
sharmatina189059 • 30 • updated 3.1 years ago
Pierre Lindenbaum 120k
0
Votes
1
Reply
516
Views
Comment: C: error while executing code for parsing genbank file
3.2 years ago
sharmatina189059 • 30
1
Vote
4
Replies
516
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error while executing code for parsing genbank file
ganbank file
3.2 years ago
sharmatina189059 • 30 • updated 3.2 years ago
Michael Dondrup 46k
0
Votes
1
Reply
469
Views
Data analysis using statistics
gene statistics
3.2 years ago
sharmatina189059 • 30 • updated 3.2 years ago
Jean-Karim Heriche 19k
0
Votes
1
Reply
591
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Comment: C: Setting up local blast on webpage
3.2 years ago
sharmatina189059 • 30
0
Votes
3
Replies
591
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Setting up local blast on webpage
blast
3.2 years ago
sharmatina189059 • 30 • updated 3.2 years ago
Jean-Karim Heriche 19k
0
Votes
1
Reply
903
Views
Comment: C: genbank parsing using perl
3.2 years ago
sharmatina189059 • 30
0
Votes
1
Reply
903
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Comment: C: genbank parsing using perl
3.2 years ago
sharmatina189059 • 30
0
Votes
5
Replies
903
Views
genbank parsing using perl
genome parse genbank file
3.2 years ago
sharmatina189059 • 30 • updated 3.2 years ago
Michael Dondrup 46k
0
Votes
1
Reply
543
Views
Can liftover utilities of UCSE browser be used for bacterial genomic coordinates?
genome Tool
3.2 years ago
sharmatina189059 • 30 • updated 3.2 years ago
genecats.ucsc • 560
5
Votes
15
Replies
841
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code for text file parsing
gene
3.3 years ago
sharmatina189059 • 30 • updated 3.2 years ago
cpad0112 11k
0
Votes
1
Reply
714
Views
NCBI CDS(total) and genes (coding)
ncbi
3.2 years ago
sharmatina189059 • 30 • updated 3.2 years ago
Jean-Karim Heriche 19k
0
Votes
0
Replies
841
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Comment: C: code for text file parsing
3.3 years ago
sharmatina189059 • 30
0
Votes
1
Reply
841
Views
Comment: C: code for text file parsing
3.3 years ago
sharmatina189059 • 30 • updated 3.3 years ago
genomax 68k
0
Votes
0
Replies
841
Views
Comment: A: code for text file parsing
3.3 years ago
sharmatina189059 • 30 • updated 3.3 years ago
genomax 68k
0
Votes
0
Replies
841
Views
Comment: C: code for text file parsing
3.3 years ago
sharmatina189059 • 30
0
Votes
12
Replies
761
Views
blast query coverage using perl
blast
3.3 years ago
sharmatina189059 • 30 • updated 3.3 years ago
Michael Dondrup 46k
0
Votes
1
Reply
761
Views
Comment: C: blast query coverage using perl
3.3 years ago
sharmatina189059 • 30
0
Votes
1
Reply
761
Views
Comment: A: blast query coverage using perl
3.3 years ago
sharmatina189059 • 30
5
Votes
10
Replies
1.5k
Views
blast alignemnt query coverage
blast
3.3 years ago
sharmatina189059 • 30 • updated 3.3 years ago
geek_y 9.7k
0
Votes
2
Replies
1.5k
Views
Comment: C: blast alignemnt query coverage
3.3 years ago
sharmatina189059 • 30
0
Votes
0
Replies
1.8k
Views
Comment: C: Protein-protein interactions search (STRING DB)
3.4 years ago
sharmatina189059 • 30
0
Votes
0
Replies
956
Views
Comment: C: Retrieving protein protein interaction database using STRING database
3.4 years ago
sharmatina189059 • 30
2
Votes
4
Replies
956
Views
Retrieving protein protein interaction database using STRING database
gene sequence
3.4 years ago
sharmatina189059 • 30 • updated 3.4 years ago
Jean-Karim Heriche 19k
0
Votes
0
Replies
1.1k
Views
Comment: C: Batch Entrez (gene sequences)
3.5 years ago
sharmatina189059 • 30
0
Votes
2
Replies
1.1k
Views
Batch Entrez (gene sequences)
sequence gene
3.5 years ago
sharmatina189059 • 30
0
Votes
2
Replies
625
Views
Extract KEGG Enzyme data
genome
3.5 years ago
sharmatina189059 • 30 • updated 3.5 years ago
genomax 68k
1
Vote
1
Reply
542
Views
MEGABLAST result analysis issue
alignment
3.6 years ago
sharmatina189059 • 30 • updated 3.6 years ago
cschu181 ♦ 1.7k
0
Votes
0
Replies
655
Views
How to normalized data?
R
4.3 years ago
sharmatina189059 • 30 • updated 4.3 years ago
hostoneoffice • 0
2
Votes
5
Replies
1.4k
Views
genbank file parsing
sequence
4.7 years ago
sharmatina189059 • 30 • updated 4.7 years ago
Jordan Anaya • 950
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