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Comment:
Comment: No valid chromosomes found! on Michigan Imputation Server
6 months ago by
graeme.thorn
▴ 100
0
votes
0
replies
566
views
Comment:
Comment: Pre-imputation checks using 1000G data (hg19) for a hg38 VCF
7 months ago by
graeme.thorn
▴ 100
0
votes
1
reply
647
views
Comment:
Comment: Michigan Imputation Server low reference overlap
8 months ago by
graeme.thorn
▴ 100
0
votes
0
replies
587
views
Comment:
Comment: Skewed qq plot from logistic regression
9 months ago by
graeme.thorn
▴ 100
1
vote
0
replies
1.0k
views
Comment:
Comment: write output files with default name
11 months ago by
graeme.thorn
▴ 100
0
votes
1
reply
1.4k
views
Comment:
Comment: Hard filtering on GATK HaplotypeCaller giving multiple warnings
2.1 years ago by
graeme.thorn
▴ 100
0
votes
1
reply
1.1k
views
Comment:
Comment: Extracting ENST ids from coordinates
2.5 years ago by
graeme.thorn
▴ 100
0
votes
0
replies
1.1k
views
Comment:
Comment: Easy comparison between Whippet, SplAdder and DExSeq differential splicing analy
2.5 years ago by
graeme.thorn
▴ 100
0
votes
1
reply
1.4k
views
Comment:
Comment: Intersecting compressed gVCF with bed file
2.7 years ago by
graeme.thorn
▴ 100
0
votes
1
reply
1.3k
views
Comment:
Comment: Consensus deduplication issues with non-matching/'slippy' primers?
3.0 years ago by
graeme.thorn
▴ 100
0
votes
1
reply
1.3k
views
Comment:
Comment: Consensus deduplication issues with non-matching/'slippy' primers?
3.0 years ago by
graeme.thorn
▴ 100
0
votes
1
reply
1.4k
views
Comment:
C: Mutation calling directly from FASTQ files
3.5 years ago by
graeme.thorn
▴ 100
0
votes
0
replies
1.5k
views
Comment:
C: GATK VariantFiltration multiple filters including genotype for multi-sample VCF
3.9 years ago by
graeme.thorn
▴ 100
0
votes
0
replies
1.3k
views
Comment:
C: RNAseq and PAM50 prediction
4.0 years ago by
graeme.thorn
▴ 100
0
votes
0
replies
7.9k
views
Comment:
C: Downloading hg38 centromere and telomere positions from UCSC table browser
4.1 years ago by
graeme.thorn
▴ 100
0
votes
0
replies
3.4k
views
Comment:
C: Understanding columns of ChIP-Seq BED file format
4.7 years ago by
graeme.thorn
▴ 100
0
votes
0
replies
3.9k
views
Comment:
C: Consensus reads from UMIs
4.7 years ago by
graeme.thorn
▴ 100
0
votes
0
replies
2.3k
views
Comment:
C: BWA mapping parameters for DNA capture sequencing protocol
4.8 years ago by
graeme.thorn
▴ 100
0
votes
1
reply
2.3k
views
Comment:
C: BWA mapping parameters for DNA capture sequencing protocol
4.8 years ago by
graeme.thorn
▴ 100
0
votes
0
replies
888
views
Comment:
C: Best practice for serial variant calling
4.9 years ago by
graeme.thorn
▴ 100
0
votes
1
reply
888
views
Comment:
C: Best practice for serial variant calling
4.9 years ago by
graeme.thorn
▴ 100
0
votes
1
reply
2.2k
views
Comment:
C: Formating RNA-seq with UMIs in unmapped BAM files to UMI-tools compatible FASTQ
5.2 years ago by
graeme.thorn
▴ 100
0
votes
0
replies
2.2k
views
Comment:
C: Formating RNA-seq with UMIs in unmapped BAM files to UMI-tools compatible FASTQ
5.2 years ago by
graeme.thorn
▴ 100
1
vote
0
replies
1.7k
views
Comment:
C: How do I download TCGA SNV data for patients with ER+/HER2- breast cancer?
5.2 years ago by
graeme.thorn
▴ 100
0
votes
0
replies
1.8k
views
Comment:
C: Filtering IonTorrent variant caller VCFs
5.2 years ago by
graeme.thorn
▴ 100
0
votes
1
reply
2.1k
views
Comment:
C: Variant calling using IonTorrent caller correcting for deamination
5.3 years ago by
graeme.thorn
▴ 100
0
votes
0
replies
1.3k
views
Comment:
C: IonTorrent variant calling: "Missing ZM: tags"
5.6 years ago by
graeme.thorn
▴ 100
0
votes
0
replies
2.5k
views
Comment:
C: Downloading triple negative breast cancer data from ICGC
5.8 years ago by
graeme.thorn
▴ 100
0
votes
1
reply
2.5k
views
Comment:
C: Downloading triple negative breast cancer data from ICGC
5.8 years ago by
graeme.thorn
▴ 100
0
votes
1
reply
3.4k
views
Comment:
C: bedtools intersect "complete outer join"
6.6 years ago by
graeme.thorn
▴ 100
0
votes
0
replies
4.4k
views
Comment:
C: Error in GSNAP - unable to find genome in directory
8.4 years ago by
graeme.thorn
▴ 100
0
votes
0
replies
4.4k
views
Comment:
C: Error in GSNAP - unable to find genome in directory
8.4 years ago by
graeme.thorn
▴ 100
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