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3
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4.3k
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Answer: A: perl script for multifasta sequence analysis
updated 3.7 years ago by 43k • written 9.0 years ago by ★ 3.0k
2
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0
replies
12k
views
Answer: A: Generate consensus from BAM file
updated 4.1 years ago by 35k • written 9.3 years ago by ★ 3.0k
1
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1
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3.2k
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Answer: A: Crazy coverage in assembly of chloroplast
updated 4.4 years ago by 43k • written 8.4 years ago by ★ 3.0k
1
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0
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3.2k
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Answer: A: Software or PERL code to erase non-orthologous proteins in FASTA file based on O
updated 4.5 years ago by 43k • written 8.6 years ago by ★ 3.0k
0
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0
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3.0k
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Answer: A: Assemble short reads based on k-mers
updated 4.5 years ago by 43k • written 8.8 years ago by ★ 3.0k
2
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1
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5.0k
views
Answer: A: R ggtree adding metadata based on tree structure
4.5 years ago by thackl ★ 3.0k
3
votes
1
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6.1k
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Answer: A: Get BUSCO gene descriptions
4.7 years ago by thackl ★ 3.0k
1
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2
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1.6k
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Answer: A: retrieve multiple bacterial genes and flanking regions
4.9 years ago by thackl ★ 3.0k
0
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0
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4.5k
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Answer: A: Calculate CG content in a fastq file
5.5 years ago by thackl ★ 3.0k
0
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2
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2.7k
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Answer: A: Printable visualizations of large-scale alignments
5.5 years ago by thackl ★ 3.0k
1
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0
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3.9k
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Answer: A: Merging all sequences with identical ID's
5.5 years ago by thackl ★ 3.0k
0
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1
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4.5k
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Answer: A: error for barplot in enrichGO(clusterProfiler)
5.7 years ago by thackl ★ 3.0k
0
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0
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11k
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Answer: A: Bimodal GC content
6.6 years ago by thackl ★ 3.0k
3
votes
0
replies
1.9k
views
Answer: Answer: How can we use a read simulator to generate paired-end data with uneven coverage
updated 23 months ago by 43k • written 9.1 years ago by ★ 3.0k
0
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0
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1.4k
views
Answer: A: Is there a term for a genome assembly that is not closed?
7.6 years ago by thackl ★ 3.0k
0
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1
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2.4k
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Answer: A: ALLPATHS-LG slow ... multi threads possible ?
7.6 years ago by thackl ★ 3.0k
2
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0
replies
1.7k
views
Answer: A: Confusion about the term genome coverage
7.8 years ago by thackl ★ 3.0k
0
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0
replies
5.2k
views
Answer: A: Extracting reads mapped to any of multiple references
7.9 years ago by thackl ★ 3.0k
0
votes
1
reply
3.8k
views
Answer: A: Salmon/Sailfish for repeat element quantification?
8.1 years ago by thackl ★ 3.0k
2
votes
1
reply
3.0k
views
Answer: A: Downloading rice chloroplast genome
8.2 years ago by thackl ★ 3.0k
0
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0
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2.2k
views
Answer: Answer: regex dont match why??
updated 22 months ago by 43k • written 8.2 years ago by ★ 3.0k
0
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1
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3.8k
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Answer: A: What is "Total Length" in QUAST?
8.2 years ago by thackl ★ 3.0k
3
votes
1
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11k
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Answer: A: Bimodal GC content
8.3 years ago by thackl ★ 3.0k
0
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1
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3.5k
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Answer: A: PacBio sequences, proovread correction with Illumina HiSeq reads
8.3 years ago by thackl ★ 3.0k
5
votes
2
replies
7.8k
views
Answer: A: de novo sequence assembly with extremely high coverage
8.4 years ago by thackl ★ 3.0k
2
votes
0
replies
1.6k
views
Answer: A: How Can I perform a multiple alignment with characters?
8.4 years ago by thackl ★ 3.0k
3
votes
1
reply
4.4k
views
Answer: A: IGV view of bam
8.4 years ago by thackl ★ 3.0k
1
vote
1
reply
2.6k
views
Answer: A: QUAST alignment contig retrieval
8.5 years ago by thackl ★ 3.0k
3
votes
2
replies
3.3k
views
Answer: A: Perl script for reformatting a plink/seq output file
8.6 years ago by thackl ★ 3.0k
0
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0
replies
2.0k
views
Answer: A: bacterial genome annotation for rna seq analysis
8.6 years ago by thackl ★ 3.0k
0
votes
0
replies
1.7k
views
Answer: A: Removed contigs and genes from assembly by HaploMerger
8.6 years ago by thackl ★ 3.0k
2
votes
1
reply
7.2k
views
Answer: A: Average coverage of de novo SPAdes assembly deviates a lot from theretical cover
8.6 years ago by thackl ★ 3.0k
4
votes
1
reply
4.7k
views
Answer: A: coverage bed error but produces output file
8.6 years ago by thackl ★ 3.0k
6
votes
1
reply
2.4k
views
Answer: A: Illumina PE - what are causes for coverage drops?
8.6 years ago by thackl ★ 3.0k
2
votes
0
replies
5.1k
views
Answer: A: Extracting specific sequences from a big fasta file using ids of the sequences t
8.6 years ago by thackl ★ 3.0k
1
vote
0
replies
6.8k
views
Answer: A: How to plot length distribution of contigs in the assembly?
8.6 years ago by thackl ★ 3.0k
0
votes
0
replies
3.9k
views
Answer: A: Tool for PacBio Denovo assembly of diploid plant genome (size 500mb) having aro
8.6 years ago by thackl ★ 3.0k
0
votes
0
replies
3.3k
views
Answer: A: Samtools view pipe and position
8.6 years ago by thackl ★ 3.0k
4
votes
1
reply
1.8k
views
Answer: Answer: how to find full mitochondrial genome of plants in gene bank?
updated 19 months ago by 43k • written 8.6 years ago by ★ 3.0k
1
vote
1
reply
2.2k
views
Answer: Answer: What is nucleotide substitution rate (of aligned sequences)?
updated 19 months ago by 43k • written 8.6 years ago by ★ 3.0k
0
votes
1
reply
12k
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Answer: A: Bowtie2 Alignment summary
8.6 years ago by thackl ★ 3.0k
1
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1
reply
2.4k
views
Answer: A: What Quality Control software should i use?
8.7 years ago by thackl ★ 3.0k
3
votes
2
replies
9.2k
views
Answer: A: How do I compute the effective genome size?
8.7 years ago by thackl ★ 3.0k
2
votes
3
replies
9.1k
views
Answer: A: How to generate contigs from bam alignment
8.7 years ago by thackl ★ 3.0k
1
vote
0
replies
15k
views
Answer: A: How Does Assembled Contigs Get Mapped To A Chromosome?
8.7 years ago by thackl ★ 3.0k
1
vote
1
reply
9.1k
views
Answer: Answer: How to generate contigs from bam alignment
updated 19 months ago by 43k • written 8.7 years ago by ★ 3.0k
0
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0
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5.1k
views
Answer: Answer: How To Adjust Bwa Mem To Allow For Longer Gaps In Contig Alignment
updated 19 months ago by 43k • written 8.7 years ago by ★ 3.0k
2
votes
1
reply
8.5k
views
Answer: Answer: Randomize order of sequences in a fasta file
updated 19 months ago by 43k • written 8.7 years ago by ★ 3.0k
0
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1
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3.0k
views
Answer: A: unalign bam and convert to fastq
8.7 years ago by thackl ★ 3.0k
3
votes
1
reply
3.6k
views
Answer: Answer: Perl : String comparison problem
updated 18 months ago by 43k • written 8.8 years ago by ★ 3.0k
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