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Mat
Mat
Reputation:
80
Joined:
12.8 years ago
Last seen:
2.8 years ago
Location:
Germany
Latest posts by user
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Comment: Comment: Is it possible to convert 3 prime sequencing read counts into TPMs?
written by Mat • Mat
0 votes
2 replies
1.3K views
Is it possible to convert 3 prime sequencing read counts into TPMs?
rnaseq tpm expression
written by Mat • Mat
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1 reply
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Comment: Comment: Salmon alignment based quantification
written by Mat • Mat
0 votes
1 reply
1.3K views
High amount of intronic/intergenic reads in SMARTer stranded total bulk RNAseq
rna-seq dna smarter
updated by Ram Ram • written by Mat • Mat
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Comment: Comment: General approach for unsupervised clustering of bulk RNAseq samples and deriving
written by Mat • Mat
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Comment: Comment: General approach for unsupervised clustering of bulk RNAseq samples and deriving
written by Mat • Mat
0 votes
3 replies
2.5K views
General approach for unsupervised clustering of bulk RNAseq samples and deriving/applying gene signature
clustering rnaseq deseq2
written by Mat • Mat
0 votes
1 reply
885 views
Methods to identify genes/pathways that cause upregulation of specific gene of interest
pathway rnaseq
updated by aimanbarki • aimanbarki • written by Mat • Mat
0 votes
1 reply
2.5K views
How to remove nextera with fastp
rnaseq nextera fastp ngs
updated by Istvan Albert Istvan Albert • written by Mat • Mat
3 votes
2 replies
2.8K views
Batch effects from sequencing samples accross multiple flow cells.
rna-seq batch batch-effect sequencing
updated by Ram Ram • written by Mat • Mat
0 votes
1 reply
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Comment: C: Duplication rate differs up to 30% from that of Fastqc for single end reads
written by Mat • Mat
1 vote
3 replies
2.5K views
Duplication rate differs up to 30% from that of Fastqc for single end reads
rna-seq fastqc fastp
written by Mat • Mat
1 vote
0 replies
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Comment: C: Keep Format and Individual fields when annotating VCF with VEP
written by Mat • Mat
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0 replies
1.6K views
Variant training set for Zebrafish to apply GATK VariantRecalibrator
snp zebrafish gatk genotyping-by-sequencing ngs
written by Mat • Mat
1 vote
1 reply
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Answer: A: How to get the beginning and end-positions of a QTL-interval after doing QTL-ana
written by Mat • Mat
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0 replies
1.9K views
Is allele switching necessary before QTL mapping can be performed?
qtl mapping
written by Mat • Mat
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0 replies
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Comment: C: QTL mapping vs. Association mapping for bi-parental crosses
written by Mat • Mat
0 votes
2 replies
3.1K views
QTL mapping vs. Association mapping for bi-parental crosses
qtl mapping
written by Mat • Mat
1 vote
0 replies
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Answer: A: Downloading synonyms for dbSNP rsids
updated by Ram Ram • written by Mat • Mat
0 votes
1 reply
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Comment: C: Flip Gwas Data To Positive Strand (Hg19 Build 37)
written by Mat • Mat
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