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arnstrm
arnstrm
Reputation:
1,850
Joined:
13.3 years ago
Last seen:
1 month ago
Location:
Ames, IA
Latest posts by user
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Job: Assistant Professor of Plant Systems Biology (Iowa State University)
faculty assistant-professor
updated by Ram Ram • written by arnstrm arnstrm
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Comment: Comment: Detecting Inversions from Genome Alignments
written by arnstrm arnstrm
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Job: Research Scientist III at Genome Informatics Facility, Iowa State University
core-facility plants genomics assembly
updated by Ram Ram • written by arnstrm arnstrm
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1.3K views
Job: Research Scientist IV at Genome Informatics Facility, Iowa State University
core-facility plants genomics assembly
updated by Ram Ram • written by arnstrm arnstrm
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Answer: A: [bcftools] [linux cluster] subset vcf.gz file per snp keeping headers and column
written by arnstrm arnstrm
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Comment: C: Softwares for gene annotation
written by arnstrm arnstrm
2 votes
1 reply
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Comment: C: Confusion with grep command
written by arnstrm arnstrm
1 vote
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Comment: C: Problem in execution of the commands in HMMER
written by arnstrm arnstrm
1 vote
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Answer: A: Problem in execution of the commands in HMMER
written by arnstrm arnstrm
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Comment: C: slurm and CfnCluster auto-scaling
written by arnstrm arnstrm
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Job: Postdoctoral Researcher: Computational Biologist
postdoc research
updated by Ram Ram • written by arnstrm arnstrm
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Job: Senior Bioinformatician (Associate Scientist) postion at Iowa State University
bioinformatician core research academic
updated by Ram Ram • written by arnstrm arnstrm
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Answer: A: Enrichment Analysis from DESeq2 data
written by arnstrm arnstrm
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Comment: C: BUSCOs running time
written by arnstrm arnstrm
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Comment: C: Constructing HMM profile for any given aligned sequences?
written by arnstrm arnstrm
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Comment: C: Metagenome/metatranscriptome db with blast option?
written by arnstrm arnstrm
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Answer: A: A possible script request for a task probably cannot be done in Excel
written by arnstrm arnstrm
2 votes
1 reply
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Answer: A: How to remove contigs below 201 nuclotide from a genome assembly?
written by arnstrm arnstrm
2 votes
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Comment: C: Constructing HMM profile for any given aligned sequences?
written by arnstrm arnstrm
1 vote
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Answer: A: finding repeats in de-novo assembled contig from PacBio reads
written by arnstrm arnstrm
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