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pjb39
pjb39
Reputation:
220
Joined:
6.2 years ago
Last seen:
2.2 years ago
Location:
USA/Ithaca,NY/USDA-ARS
Latest posts by user
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Comment: Comment: Practical Haplotype Graph v2 not finding correct paths
written by pjb39 • pjb39
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Answer: Answer: Practical Haplotype Graph v2 not finding correct paths
written by pjb39 • pjb39
2 votes
1 reply
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Answer: Answer: How to look up gene names using SNP locations on Practical Haplotype Graph
written by pjb39 • pjb39
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Comment: Comment: Practical Haplotype Graph Paths
written by pjb39 • pjb39
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Comment: Comment: Practical Haplotype Graph Paths
written by pjb39 • pjb39
1 vote
1 reply
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Comment: Comment: Practical Haplotype Graph Paths
written by pjb39 • pjb39
1 vote
1 reply
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Comment: Comment: Practical Haplotype Graph Paths
written by pjb39 • pjb39
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Comment: Comment: output same result using different imputed data and same reference panel
written by pjb39 • pjb39
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Comment: Comment: Practical Haplotype Graph Paths
written by pjb39 • pjb39
0 votes
1 reply
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Answer: Answer: output same result using different imputed data and same reference panel
written by pjb39 • pjb39
1 vote
1 reply
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Comment: Comment: Practical Haplotype Graph Paths
written by pjb39 • pjb39
1 vote
0 replies
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Answer: Answer: PHG - ImputePipelinePlugin fails when trying to imputing SNPs on a gvcf file.
written by pjb39 • pjb39
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Comment: Comment: Practical Haplotype Graph Consensus and Imputation Specifications
written by pjb39 • pjb39
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1 reply
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Answer: Answer: imputing haplotypes from variants in a VCF file - vcfIndexFile
written by pjb39 • pjb39
2 votes
1 reply
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Answer: Answer: Practical Haplotype Graph Consensus and Imputation Specifications
written by pjb39 • pjb39
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Answer: Answer: PHG Imputation
written by pjb39 • pjb39
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Answer: Answer: CreatePHG_step2_consensu
written by pjb39 • pjb39
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Answer: Answer: CreatePHG_step2_consensu
written by pjb39 • pjb39
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1 reply
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Answer: Answer: ImputewithPHG_main:fastq
written by pjb39 • pjb39
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2 replies
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Answer: Answer: Impute variants with the PHG. Pipeline and VCF final output for each sample
written by pjb39 • pjb39
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