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Beginner
Beginner
Reputation:
90
Joined:
7.3 years ago
Last seen:
5 months ago
Location:
Germany
Latest posts by user
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Comment: Comment: Weak overlap of cell states of scRNAseq and Xenium data of the same samples
written by Beginner • Beginner
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1 reply
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Comment: Comment: Weak overlap of cell states of scRNAseq and Xenium data of the same samples
written by Beginner • Beginner
0 votes
4 replies
597 views
Weak overlap of cell states of scRNAseq and Xenium data of the same samples
xenium
written by Beginner • Beginner
0 votes
2 replies
1.8K views
Can´t acces Biomart via R anymore
biomart
updated by swbarnes2 swbarnes2 • written by Beginner • Beginner
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2 replies
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Comment: A: Mapping sequencing reads to 5-UTR, 3-UTR and CDS using Ensembl GTF files
written by Beginner • Beginner
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Comment: C: Mapping sequencing reads to 5-UTR, 3-UTR and CDS (fasta or gtf?)
written by Beginner • Beginner
1 vote
7 replies
5.2K views
Mapping sequencing reads to 5-UTR, 3-UTR and CDS using Ensembl GTF files
rna-seq alignment sequencing genome
written by Beginner • Beginner
8 votes
0 replies
0 views
Answer: C: Is it okay to use a ENSEMBL toplevel genome for mapping when no primary assembly
written by Beginner • Beginner
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2 replies
4.3K views
Is it okay to use a ENSEMBL toplevel genome for mapping when no primary assembly is available?
genome ensembl
written by Beginner • Beginner
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Comment: C: Why and how to discard mapped reads based on strandedness?
written by Beginner • Beginner
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2 replies
1.4K views
Why and how to discard mapped reads based on strandedness?
rna-seq ribosome profiling strandedness
updated by swbarnes2 swbarnes2 • written by Beginner • Beginner
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Comment: C: Probably very simple question for gffread
written by Beginner • Beginner
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4 replies
1.5K views
Probably very simple question for gffread
gffread
updated by Dave Carlson Dave Carlson • written by Beginner • Beginner
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Answer: A: rRNA and tRNA removal from mouse Ribosome profiling data - getting correct seque
written by Beginner • Beginner
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1 reply
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Comment: C: rRNA and tRNA removal from mouse Ribosome profiling data - getting correct seque
written by Beginner • Beginner
0 votes
4 replies
5.3K views
rRNA and tRNA removal from mouse Ribosome profiling data - getting correct sequences
rrna trna ribosome profiling ribo-seq
updated by Daniel • Daniel • written by Beginner • Beginner
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0 replies
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Comment: C: How to filter sequencing reads in a fastq file by size?
written by Beginner • Beginner
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1 reply
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Comment: C: How to filter sequencing reads in a fastq file by size?
written by Beginner • Beginner
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0 replies
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Comment: C: How to filter sequencing reads in a fastq file by size?
written by Beginner • Beginner
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6 replies
8.7K views
How to filter sequencing reads in a fastq file by size?
ribo-seq rna-seq fastq
updated by Ram Ram • written by Beginner • Beginner
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