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rah
rah
Reputation:
30
Joined:
7.5 years ago
Last seen:
4.3 years ago
Location:
Denmark
Latest posts by user
0 votes
2 replies
1.6K views
Samtools pileup extract read length for position
snp pileup samtools bam
updated by swbarnes2 swbarnes2 • written by rah • rah
0 votes
1 reply
0 views
Comment: C: change missing genotype in bcf file from 0/0 to ./. to run plink
written by rah • rah
0 votes
3 replies
2.1K views
change missing genotype in bcf file from 0/0 to ./. to run plink
bcftools plink snp genotype bcf
written by rah • rah
0 votes
0 replies
0 views
Comment: C: Human contamination in Chimpanzee or Bonobo data
written by rah • rah
0 votes
2 replies
1.2K views
Human contamination in Chimpanzee or Bonobo data
next-gen sequencing contamination alignment
written by rah • rah
0 votes
0 replies
0 views
Comment: C: Combine multiple samtools view
written by rah • rah
0 votes
3 replies
1.8K views
Combine multiple samtools view
samtools bam alignment
updated by GenoMax GenoMax • written by rah • rah
1 vote
0 replies
1.2K views
Htslib c++ library faidx fetch region
samtools cpp faidx htslib
updated by Ram Ram • written by rah • rah
0 votes
3 replies
5.3K views
Gene Annotation in Bed file
gene annotation disease
updated by Haci Haci • written by rah • rah
0 votes
1 reply
2.2K views
Mapping quality in Oxford Nanopore
minimap2 mapping quality oxford nanopore
updated by Biostar Biostar • written by rah • rah
0 votes
0 replies
0 views
Comment: C: Low Mapping percentage with Minimap2 due to contamination
written by rah • rah
0 votes
0 replies
0 views
Comment: C: Low Mapping percentage with Minimap2 due to contamination
written by rah • rah
0 votes
4 replies
3.6K views
Low Mapping percentage with Minimap2 due to contamination
reference genome minimap2 mapping nanopore
written by rah • rah
0 votes
0 replies
0 views
Comment: C: Extract several parts from fasta header
written by rah • rah
0 votes
0 replies
0 views
Comment: C: Extract several parts from fasta header
written by rah • rah
0 votes
0 replies
0 views
Comment: C: Extract several parts from fasta header
written by rah • rah
0 votes
6 replies
2.6K views
Extract several parts from fasta header
fasta grep sed unix bash
written by rah • rah
0 votes
0 replies
0 views
Comment: C: Bash: For loop with two statements, first statements as input to second with .fa
written by rah • rah
0 votes
0 replies
0 views
Comment: C: Bash: For loop with two statements, first statements as input to second with .fa
written by rah • rah
0 votes
1 reply
1.4K views
Bash: selecting directory and fasta files from assembly
assembly fasta unix bash assembly
updated by Ram Ram • written by rah • rah
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