This is a test version of Biostars. For the public version, visit https://www.biostars.org.
jammydodger123456
jammydodger123456
Reputation:
40 (New)
Joined:
9.3 years ago
Last seen:
1.7 years ago
Location:
United Kingdom
Latest posts by user
0 votes
1 reply
0 views
Comment: Comment: Extract reads that didn't contribute to miRNAs following miRDeep2 analysis
written by jammydodger123456 4
0 votes
3 replies
1.1K views
Extract reads that didn't contribute to miRNAs following miRDeep2 analysis
mirna mirdeep2 small rna
updated by GenoMax 16K • | written by jammydodger123456 4
0 votes
1 reply
677 views
Retrieve a % coverage for each transcript
rna-seq
updated by Ram 4.5K • | written by jammydodger123456 4
0 votes
0 replies
964 views
Kraken2 + Bracken with short reads (~20 bases) as input
bracken smallrnaseq kraken2
written by jammydodger123456 4
0 votes
1 reply
0 views
Comment: Comment: miRDeep2 mapper.pl not generating *collapsed.fa and/or *.arf files correctly?
written by jammydodger123456 4
0 votes
3 replies
1.8K views
miRDeep2 mapper.pl not generating *collapsed.fa and/or *.arf files correctly?
small rna mirdeep2 sequencing
updated by Trivas 191 • | written by jammydodger123456 4
0 votes
1 reply
1.9K views
miRDeep2 Mapper "Bowtie mapping tool not installed"
rna-seq mirna bowtie
updated by Barry Digby 135 • | written by jammydodger123456 4
1 vote
1 reply
2.2K views
Stringtie merge generates close duplicates of original transcripts
stringtie
written by jammydodger123456 4
0 votes
1 reply
1 view
Comment: C: Stringtie output gtf file only contains STRG transripts, no original annotations
written by jammydodger123456 4
2 votes
4 replies
4.1K views
Stringtie output gtf file only contains STRG transripts, no original annotations
stringtie
written by jammydodger123456 4
0 votes
1 reply
0 views
Comment: C: FPKM values all 0 from Stringtie
written by jammydodger123456 4
0 votes
1 reply
0 views
Comment: C: FPKM values all 0 from Stringtie
written by jammydodger123456 4
0 votes
5 replies
2.6K views
FPKM values all 0 from Stringtie
rna-seq stringtie
written by jammydodger123456 4
0 votes
0 replies
0 views
Comment: C: Cuffdiff contrast run error: "Malformed record in sample sheet" and "cuffdiff re
written by jammydodger123456 4
0 votes
2 replies
2.7K views
Cuffdiff contrast run error: "Malformed record in sample sheet" and "cuffdiff requires at least 2 SAM files"
rna-seq cufflinks cuffdiff
updated by Satyajeet Khare 163 • | written by jammydodger123456 4
0 votes
1 reply
0 views
Comment: C: Differences in FPKM values for same sample in multiple comparisons
written by jammydodger123456 4
1 vote
2 replies
4.0K views
Presenting differential expression data containing infinite log2(Fold Change)s
rna-seq
updated by Satyajeet Khare 163 • | written by jammydodger123456 4
0 votes
0 replies
0 views
Answer: A: Differences in FPKM values for same sample in multiple comparisons
written by jammydodger123456 4
0 votes
0 replies
0 views
Comment: C: Differences in FPKM values for same sample in multiple comparisons
written by jammydodger123456 4
0 votes
7 replies
3.2K views
Differences in FPKM values for same sample in multiple comparisons
cufflinks rna-seq
written by jammydodger123456 4
Latest awards to user
TODO: Awards