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jammydodger123456
jammydodger123456
Reputation:
40
Joined:
9.0 years ago
Last seen:
1.5 years ago
Location:
United Kingdom
Latest posts by user
0 votes
1 reply
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Comment: Comment: Extract reads that didn't contribute to miRNAs following miRDeep2 analysis
written by jammydodger123456 • jammydodger123456
0 votes
3 replies
1.0K views
Extract reads that didn't contribute to miRNAs following miRDeep2 analysis
mirna mirdeep2 small rna
updated by GenoMax GenoMax • written by jammydodger123456 • jammydodger123456
0 votes
1 reply
645 views
Retrieve a % coverage for each transcript
rna-seq
updated by Ram Ram • written by jammydodger123456 • jammydodger123456
0 votes
0 replies
931 views
Kraken2 + Bracken with short reads (~20 bases) as input
bracken smallrnaseq kraken2
written by jammydodger123456 • jammydodger123456
0 votes
1 reply
0 views
Comment: Comment: miRDeep2 mapper.pl not generating *collapsed.fa and/or *.arf files correctly?
written by jammydodger123456 • jammydodger123456
0 votes
3 replies
1.7K views
miRDeep2 mapper.pl not generating *collapsed.fa and/or *.arf files correctly?
small rna mirdeep2 sequencing
updated by Trivas • Trivas • written by jammydodger123456 • jammydodger123456
0 votes
1 reply
1.9K views
miRDeep2 Mapper "Bowtie mapping tool not installed"
rna-seq mirna bowtie
updated by Barry Digby Barry Digby • written by jammydodger123456 • jammydodger123456
1 vote
1 reply
2.2K views
Stringtie merge generates close duplicates of original transcripts
stringtie
written by jammydodger123456 • jammydodger123456
0 votes
1 reply
1 view
Comment: C: Stringtie output gtf file only contains STRG transripts, no original annotations
written by jammydodger123456 • jammydodger123456
2 votes
4 replies
4.0K views
Stringtie output gtf file only contains STRG transripts, no original annotations
stringtie
written by jammydodger123456 • jammydodger123456
0 votes
1 reply
0 views
Comment: C: FPKM values all 0 from Stringtie
written by jammydodger123456 • jammydodger123456
0 votes
1 reply
0 views
Comment: C: FPKM values all 0 from Stringtie
written by jammydodger123456 • jammydodger123456
0 votes
5 replies
2.5K views
FPKM values all 0 from Stringtie
rna-seq stringtie
written by jammydodger123456 • jammydodger123456
0 votes
0 replies
0 views
Comment: C: Cuffdiff contrast run error: "Malformed record in sample sheet" and "cuffdiff re
written by jammydodger123456 • jammydodger123456
0 votes
2 replies
2.7K views
Cuffdiff contrast run error: "Malformed record in sample sheet" and "cuffdiff requires at least 2 SAM files"
rna-seq cufflinks cuffdiff
updated by Satyajeet Khare Satyajeet Khare • written by jammydodger123456 • jammydodger123456
0 votes
1 reply
0 views
Comment: C: Differences in FPKM values for same sample in multiple comparisons
written by jammydodger123456 • jammydodger123456
1 vote
2 replies
4.0K views
Presenting differential expression data containing infinite log2(Fold Change)s
rna-seq
updated by Satyajeet Khare Satyajeet Khare • written by jammydodger123456 • jammydodger123456
0 votes
0 replies
0 views
Answer: A: Differences in FPKM values for same sample in multiple comparisons
written by jammydodger123456 • jammydodger123456
0 votes
0 replies
0 views
Comment: C: Differences in FPKM values for same sample in multiple comparisons
written by jammydodger123456 • jammydodger123456
0 votes
7 replies
3.2K views
Differences in FPKM values for same sample in multiple comparisons
cufflinks rna-seq
written by jammydodger123456 • jammydodger123456
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