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jespinoz
jespinoz
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9.5 years ago
Last seen:
8.7 years ago
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Comment: C: Is there a list of E. coli genes whose promoters use sigma factor 70 (sigma70)?
written by jespinoz • jespinoz
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Is there a list of E. coli genes whose promoters use sigma factor 70 (sigma70)?
transcription sigma genomics e.coli rna-seq
updated by Ram Ram • written by jespinoz • jespinoz
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1.7K views
What Blosum matrix to use for ortholog table?
genome phylogeny ortholog blosum
written by jespinoz • jespinoz
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1 reply
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Comment: C: How to build HMM from position weight matrix?
written by jespinoz • jespinoz
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4 replies
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How to build HMM from position weight matrix?
meme motif hmm pwm
written by jespinoz • jespinoz
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1 reply
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Comment: C: How to fill in missing fields on a VCF to convert into a genotype matrix?
written by jespinoz • jespinoz
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3 replies
2.9K views
How to fill in missing fields on a VCF to convert into a genotype matrix?
vcf genotype matrix bcf snps
written by jespinoz • jespinoz
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Comment: C: GT and GL fields in VCF file
written by jespinoz • jespinoz
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1 reply
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Comment: C: How to convert vcf file into data matrix for machine-learning?
written by jespinoz • jespinoz
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Comment: C: remove private alleles from a vcf file
written by jespinoz • jespinoz
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1 reply
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Comment: C: How to convert vcf file into data matrix for machine-learning?
written by jespinoz • jespinoz
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1 reply
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Comment: C: How to extract specific chromosome from vcf file
written by jespinoz • jespinoz
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5 replies
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How to convert vcf file into data matrix for machine-learning?
vcf bcf vcftools genotype machine-learning
written by jespinoz • jespinoz
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Answer: A: Cannot merge BCF files with `bcftools` files because "Index required, expected .
written by jespinoz • jespinoz
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1 reply
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Comment: C: vcf not indexing
written by jespinoz • jespinoz
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1 reply
4.9K views
Cannot merge BCF files with `bcftools` files because "Index required, expected .vcf.gz or .bcf file" ?
bcf vcf merge index snps
updated by Biostar Biostar • written by jespinoz • jespinoz
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Comment: C: How to filter huge VCF files for datamining?
written by jespinoz • jespinoz
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Comment: C: How to filter huge VCF files for datamining?
written by jespinoz • jespinoz
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Comment: C: How to filter huge VCF files for datamining?
written by jespinoz • jespinoz
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Comment: C: How to filter huge VCF files for datamining?
written by jespinoz • jespinoz
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