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Stefano Berri
Stefano Berri
Role:
Moderator
Reputation:
4,410
Joined:
16.2 years ago
Last seen:
9.3 years ago
Location:
Cambridge, UK
Google Scholar:
IaUAw6AAAAAJ&hl
Twitter:
@5tefano8erri

Trained in molecular biology I slowly moved to the computational side and data anlysis of genomic data. I am now a bioinformatics scientist working at Illumina within the "Population and Medical Genomics" group. My interests are in genomics, molecular biology, cancer biology, tumour evolution and reproducible science. I regularly use R/Bioconductor, Python, SQL I know a thing or two about copy number abnormalities in cancer and I develop tools to analyse Next Generation Sequencing data.

Latest posts by user
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Comment: C: CWL: Loops and if conditionals
written by Stefano Berri Stefano Berri
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Comment: C: cwltool SGE support for CWL parallel tasks
written by Stefano Berri Stefano Berri
1 vote
3 replies
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cwltool SGE support for CWL parallel tasks
cwl toil sge
updated by Biostar Biostar • written by Stefano Berri Stefano Berri
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Comment: C: CNV from FFPE genomes
written by Stefano Berri Stefano Berri
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1 reply
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Answer: A: Is there anyone who was a pure biologist?
updated by Ram Ram • written by Stefano Berri Stefano Berri
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Comment: C: Recommended Approach For Copy Number Analysis In Non-Human Organisms
written by Stefano Berri Stefano Berri
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Comment: C: Recommended Approach For Copy Number Analysis In Non-Human Organisms
written by Stefano Berri Stefano Berri
1 vote
2 replies
111 views
Answer: A: Recommended Approach For Copy Number Analysis In Non-Human Organisms
written by Stefano Berri Stefano Berri
1 vote
0 replies
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Comment: C: What Does Distinguish Header From Content In Bed Files?
written by Stefano Berri Stefano Berri
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Comment: C: What Does Distinguish Header From Content In Bed Files?
written by Stefano Berri Stefano Berri
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Comment: C: What Does Distinguish Header From Content In Bed Files?
written by Stefano Berri Stefano Berri
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1 reply
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Comment: C: What Does Distinguish Header From Content In Bed Files?
written by Stefano Berri Stefano Berri
4 votes
11 replies
13K views
What Does Distinguish Header From Content In Bed Files?
bed parsing format
updated by Biostar Biostar • written by Stefano Berri Stefano Berri
4 votes
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215 views
Answer: A: Rna-Seq: Treat Samples As Biological Replicates?
written by Stefano Berri Stefano Berri
13 votes
0 replies
192 views
Answer: A: Discrimination Between Germline And Somatic Mutations In Tumor Without The Avail
written by Stefano Berri Stefano Berri
4 votes
0 replies
298 views
Answer: A: Best Practices For Pipeline Versioning
written by Stefano Berri Stefano Berri
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Comment: C: How To Use Perl To Submit Mpiblast Jobs Via Qsub
written by Stefano Berri Stefano Berri
1 vote
1 reply
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Comment: C: How To Use Perl To Submit Mpiblast Jobs Via Qsub
written by Stefano Berri Stefano Berri
2 votes
2 replies
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Answer: A: How To Use Perl To Submit Mpiblast Jobs Via Qsub
written by Stefano Berri Stefano Berri
2 votes
0 replies
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Answer: A: Copy Number Variation For Haploid Organisms
written by Stefano Berri Stefano Berri
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