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vaslanzadeh
vaslanzadeh
Reputation:
20
Joined:
10.3 years ago
Last seen:
3.5 years ago
Location:
United Kingdom
Latest posts by user
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Comment: Comment: counting reads in a fastq file using a refrence fasta file
written by vaslanzadeh • vaslanzadeh
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2 replies
1.3K views
counting reads in a fastq file using a refrence fasta file
fastq alignment readcount
written by vaslanzadeh • vaslanzadeh
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Comment: C: Amplicon variant calling from PacBio CCS reads
written by vaslanzadeh • vaslanzadeh
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2 replies
1.1K views
Amplicon variant calling from PacBio CCS reads
sequencing snp
updated by GenoMax GenoMax • written by vaslanzadeh • vaslanzadeh
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1 reply
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Comment: C: Pysam prints wrong outputs
written by vaslanzadeh • vaslanzadeh
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1 reply
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Comment: C: Pysam prints wrong outputs
updated by Asaf Asaf • written by vaslanzadeh • vaslanzadeh
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5 replies
2.0K views
Pysam prints wrong outputs
alignment rna-seq
updated by Biostar Biostar • written by vaslanzadeh • vaslanzadeh
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1 reply
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Comment: C: Position Of Mismatches Per Read From A Sam/Bam File
written by vaslanzadeh • vaslanzadeh
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1 reply
2.4K views
low mapping rate, finding possible source of contamination
rna-seq genome alignment blast
written by vaslanzadeh • vaslanzadeh
1 vote
2 replies
4.8K views
Interpreting trim_galore report
rna-seq
updated by GenoMax GenoMax • written by vaslanzadeh • vaslanzadeh
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1 reply
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Comment: A: Identify sequencing machine based on fastq-file/reads
written by vaslanzadeh • vaslanzadeh
1 vote
0 replies
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Comment: C: How to count the reads that overlap with 3' splice sites or 5' splice sites?
written by vaslanzadeh • vaslanzadeh
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1 reply
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Comment: C: How to count the reads that overlap with 3' splice sites or 5' splice sites?
written by vaslanzadeh • vaslanzadeh
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4 replies
3.9K views
How to count the reads that overlap with 3' splice sites or 5' splice sites?
alignment rna-seq rna-seq
written by vaslanzadeh • vaslanzadeh
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