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alserg
alserg
Reputation:
1,030
Joined:
11.6 years ago
Last seen:
5 months ago
Location:
St Louis
Twitter:
assaron
Latest posts by user
2 votes
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Answer: Answer: KEGG pathways
written by alserg alserg
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Comment: Comment: Permutations FGSEA
written by alserg alserg
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Comment: Comment: Permutations FGSEA
written by alserg alserg
2 votes
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Answer: Answer: Permutations FGSEA
written by alserg alserg
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Answer: Answer: Downloading RNAseq datasets from GEO into R
written by alserg alserg
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Answer: Answer: GSEA on non-model organisms: How to handle duplicated KEGG KO
written by alserg alserg
1 vote
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Comment: Comment: Help in choosing the right metric for ranking genes in fgsea
written by alserg alserg
4 votes
2 replies
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Answer: Answer: Help in choosing the right metric for ranking genes in fgsea
written by alserg alserg
2 votes
2 replies
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Answer: Answer: Ties in reranked list
written by alserg alserg
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Comment: Comment: collapsePathways function throwing error
written by alserg alserg
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Comment: Comment: collapsePathways function throwing error
written by alserg alserg
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Answer: Answer: collapsePathways function throwing error
written by alserg alserg
4 votes
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Answer: Answer: Methods (GO & KEGG) for Gene Set Enrichment Analysis (GSEA)
written by alserg alserg
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Answer: Answer: how to convert kegg ids to gene names
written by alserg alserg
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Comment: Comment: Get distribution of enrichment scores across all permutations in fgsea
written by alserg alserg
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Comment: Comment: Finding differential subpathways of metabolic networks using RNA-seq data
written by alserg alserg
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Answer: Answer: fgsea resulting in an empty datafram
written by alserg alserg
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Comment: Comment: Query Modules from KEGG
written by alserg alserg
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Answer: Answer: Finding differential subpathways of metabolic networks using RNA-seq data
written by alserg alserg
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Comment: Comment: fgsea result "size" parameter - can I pull out size of the original pathway?
written by alserg alserg
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