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AHerik
AHerik
Reputation:
50
Joined:
3.0 years ago
Last seen:
11 months ago
Location:
Canada
Google Scholar:
mRsGySQAAAAJ

MD student @ University of Calgary. Researcher in Snyder Institute for Chronic Diseases, Calgary AB.

Latest posts by user
0 votes
1 reply
0 views
Comment: Comment: Are these 10x samples too low quality for downstream analysis?
written by AHerik • AHerik
3 votes
4 replies
3.8K views
Are these 10x samples too low quality for downstream analysis?
single-cell scrnaseq seurat 10x
updated by songli • songli • written by AHerik • AHerik
1 vote
1 reply
817 views
AMR tools for low-yield long read sequencing (MinION)
metagenomics amr resfinder minion
updated by colindaven colindaven • written by AHerik • AHerik
0 votes
0 replies
0 views
Comment: Comment: Can ARIBA AMR tool be tweaked to support long reads inputs (eg-Oxford Nanopore)?
written by AHerik • AHerik
0 votes
1 reply
0 views
Comment: Comment: DESeq2 Multifactor Design
updated by Ram Ram • written by AHerik • AHerik
0 votes
1 reply
0 views
Comment: Comment: DESeq2 Multifactor Design
written by AHerik • AHerik
1 vote
7 replies
2.1K views
DESeq2 Multifactor Design
rna-seq deseq2
updated by Ram Ram • written by AHerik • AHerik
0 votes
1 reply
0 views
Comment: Comment: Ensembl assembly choice for DNA reference with no combined primary assembly
written by AHerik • AHerik
1 vote
3 replies
1.4K views
Ensembl assembly choice for DNA reference with no combined primary assembly
alignment hisat2 rna-seq ensembl assembly
updated by GenoMax GenoMax • written by AHerik • AHerik
0 votes
0 replies
0 views
Comment: Comment: Ensembl assembly choice for RNA-Seq reference mapping
written by AHerik • AHerik
0 votes
0 replies
0 views
Comment: Comment: Normalized data values very different from unnormalized counts in Seurat
written by AHerik • AHerik
0 votes
2 replies
1.4K views
Normalized data values very different from unnormalized counts in Seurat
scrna single-cell seurat
written by AHerik • AHerik
0 votes
2 replies
0 views
Comment: Comment: Calculating FPKM and TPM by hand from htseq-count output?
written by AHerik • AHerik
1 vote
1 reply
0 views
Comment: Comment: How ti identify genes per terms in with topGO for scRNAseq dataset
written by AHerik • AHerik
1 vote
1 reply
0 views
Answer: Answer: High discordant alignment with HISAT2 Mus musculus
written by AHerik • AHerik
0 votes
1 reply
0 views
Comment: Comment: High discordant alignment with HISAT2 Mus musculus
written by AHerik • AHerik
0 votes
5 replies
2.2K views
High discordant alignment with HISAT2 Mus musculus
hisat2 rna-seq
updated by GenoMax GenoMax • written by AHerik • AHerik
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