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Ekarl2
Ekarl2
Reputation:
120
Joined:
12.0 years ago
Last seen:
10.4 years ago
Latest posts by user
0 votes
5 replies
4.6K views
RNA-seq mapper that allows variability and handles multi-mapping?
rna-seq mapping
written by Ekarl2 Ekarl2
0 votes
0 replies
0 views
Comment: C: Why do RNA-seq reads not map against clones?
updated by Ram Ram • written by Ekarl2 Ekarl2
0 votes
0 replies
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Comment: C: Why do RNA-seq reads not map against clones?
written by Ekarl2 Ekarl2
0 votes
1 reply
0 views
Comment: C: Why do RNA-seq reads not map against clones?
updated by Ram Ram • written by Ekarl2 Ekarl2
0 votes
1 reply
0 views
Comment: Comment: Why do RNA-seq reads not map against clones?
updated by Ram Ram • written by Ekarl2 Ekarl2
0 votes
8 replies
3.5K views
Why do RNA-seq reads not map against clones?
trinity rsem clone mapping rna-seq
updated by Ram Ram • written by Ekarl2 Ekarl2
0 votes
1 reply
4.6K views
Lmer() for RNA-seq with batch as random effect: how to prepare input?
lmer rna-seq batch mixed model
updated by Ram Ram • written by Ekarl2 Ekarl2
3 votes
0 replies
3.9K views
Is the following code appropriate for making a reasonable RNA-seq clustered heat map?
rna-seq heatmap scaling
written by Ekarl2 Ekarl2
0 votes
0 replies
0 views
Comment: C: Can FPKM be added?
written by Ekarl2 Ekarl2
1 vote
3 replies
3.8K views
Can FPKM be added?
fpkm rna-seq
updated by Ram Ram • written by Ekarl2 Ekarl2
0 votes
1 reply
3.5K views
EdgeR: Correcting for lane effects in addition to replicate batch effects?
edger batch-effect lane-effect
updated by Ram Ram • written by Ekarl2 Ekarl2
5 votes
2 replies
5.5K views
How to handle Trinity post-filtering singletons from paired-end sequencing?
singletons paired-end trinity
updated by Ram Ram • written by Ekarl2 Ekarl2
0 votes
1 reply
0 views
Comment: C: What is the Trinity setting max_pct_stdev?
written by Ekarl2 Ekarl2
0 votes
3 replies
2.8K views
What is the Trinity setting max_pct_stdev?
trinity rna-seq max_pct_stdev
updated by Ram Ram • written by Ekarl2 Ekarl2
0 votes
0 replies
0 views
Comment: C: RNA-seq, EdgeR and batch effects
written by Ekarl2 Ekarl2
0 votes
0 replies
0 views
Comment: C: RNA-seq, EdgeR and batch effects
written by Ekarl2 Ekarl2
1 vote
1 reply
0 views
Comment: C: RNA-seq, EdgeR and batch effects
written by Ekarl2 Ekarl2
0 votes
6 replies
9.5K views
RNA-seq, EdgeR and batch effects
rna-seq removebatcheffect edger batch-effect
updated by Ram Ram • written by Ekarl2 Ekarl2
0 votes
0 replies
0 views
Comment: C: Within-sample comparison of TMM normalized values?
written by Ekarl2 Ekarl2
0 votes
1 reply
0 views
Comment: C: Within-sample comparison of TMM normalized values?
written by Ekarl2 Ekarl2
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