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pwg46
pwg46
Reputation:
540
Joined:
12.1 years ago
Last seen:
11.3 years ago
Location:
United States
Latest posts by user
0 votes
1 reply
3.2K views
Aligning UniProt Canonical Sequences With Their Isoform Sequences
uniprot sequence canonical isoform align
updated by Elisabeth Gasteiger Elisabeth Gasteiger • written by pwg46 pwg46
0 votes
3 replies
4.0K views
How to tell if a RefSeq or UniProt protein identifier is human?
refseq uniprot human protein
updated by Ram Ram • written by pwg46 pwg46
0 votes
2 replies
2.4K views
Protein Sequence Alignment
uniprot refseq protein sequence alignment
updated by dago dago • written by pwg46 pwg46
1 vote
1 reply
3.8K views
RefSeq Version Numbers/Mapping File
transcript mapping version refseq protein
updated by Ram Ram • written by pwg46 pwg46
0 votes
4 replies
3.5K views
Data File Which Maps Between Gene Names and Uniprot Protein IDs
gene-name mapping uniprot
updated by Ram Ram • written by pwg46 pwg46
0 votes
2 replies
3.9K views
Ensembl Gene Sequence Data File?
data sequence ensg ensembl fasta
updated by Ram Ram • written by pwg46 pwg46
0 votes
0 replies
0 views
Comment: Comment: Does RefSeq DB have a CDS file for its transcripts?
updated by Ram Ram • written by pwg46 pwg46
0 votes
2 replies
4.5K views
Does RefSeq DB have a CDS file for its transcripts?
cds refseq nm coding-sequence
updated by Ram Ram • written by pwg46 pwg46
0 votes
2 replies
4.3K views
How does RefSeq get their transcript sequences?
atg sequence refseq nm identifier
updated by Ram Ram • written by pwg46 pwg46
0 votes
1 reply
0 views
Comment: Comment: How does RefSeq Calculate their Positions?
updated by Ram Ram • written by pwg46 pwg46
1 vote
3 replies
4.1K views
How does RefSeq Calculate their Positions?
mutation position ensembl refseq
updated by Ram Ram • written by pwg46 pwg46
0 votes
5 replies
5.6K views
Data file to convert from Ensembl Transcript Identifiers (ENST) to RefSeq transcript Identifiers (NM_*)
refseq ensembl
updated by Ram Ram • written by pwg46 pwg46
1 vote
3 replies
4.6K views
12.2% of protein coding transcripts in GRCh38.cds.all.fa (from Ensembl db) don't start with 'ATG'. Why is this?
grch38 cds transcript ensembl
updated by Ram Ram • written by pwg46 pwg46
0 votes
1 reply
2.6K views
The nucleotides on ENST00000347310 and ENST00000425614 do not agree on the same chromosomal position (67240275)
position nucleotide ensembl grch38 base
updated by Ram Ram • written by pwg46 pwg46
0 votes
1 reply
2.7K views
Does Uniprot Still Use GRCh37 annotations?
uniprot ensembl grch37 annotation
updated by Ram Ram • written by pwg46 pwg46
0 votes
3 replies
6.3K views
EnsGene.txt (UCSC/hg19) and Homo_sapiens.GRCh38.76.gtf (GRCH38) positions do not match
ucsc gtf match grch38 position
updated by Ram Ram • written by pwg46 pwg46
0 votes
1 reply
0 views
Comment: Comment: GRCh37/38(NCBI) vs hg19/hg38(UCSC)
updated by Ram Ram • written by pwg46 pwg46
1 vote
1 reply
0 views
Comment: Comment: GRCh37/38(NCBI) vs hg19/hg38(UCSC)
updated by Ram Ram • written by pwg46 pwg46
44 votes
8 replies
87K views
GRCh37/38(NCBI) vs hg19/hg38(UCSC)
ncbi ucsc grch38 hg38
updated by Ram Ram • written by pwg46 pwg46
1 vote
5 replies
4.0K views
What do UCSC identifiers physically represent?
identifier ucsc uc ensembl
updated by Ram Ram • written by pwg46 pwg46
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