mgl tool index error
i am getting this error again and again when loading my pdbqt file into autodock tool 1.5.7
this is the error
Traceback (most recent call last):
File "C:\Program Files (x86)\MGLTools-1.5.7\lib\site-packages\ViewerFramework\VF.py", line 941, in tryto
result = command( *args, **kw )
File "C:\Program Files (x86)\MGLTools-1.5.7\lib\site-packages\Pmv\fileCommands.py", line 1193, in doit
mols = newparser.parse()
File "C:\Program Files (x86)\MGLTools-1.5.7\lib\site-packages\MolKit\pdbParser.py", line 851, in parse
self.pdbRecordParser[record](records)
File "C:\Program Files (x86)\MGLTools-1.5.7\lib\site-packages\MolKit\pdbParser.py", line 2180, in parse_PDB_ROOT
self.mol.torTree = TorTree(self)
File "C:\Program Files (x86)\MGLTools-1.5.7\lib\site-packages\MolKit\torTree.py", line 35, in __init__
self.rootNode = self.__makeTree(parser.allLines)
File "C:\Program Files (x86)\MGLTools-1.5.7\lib\site-packages\MolKit\torTree.py", line 190, in __makeTree
newNode.bond = (int(wordList[1])-1, int(wordList[2])-1)
IndexError: list index out of range
• 802 views
•
link
0 answers
No answers yet.
Log in to answer this question.
Are you using command line or some sort of GUI? Post the full command if you are doing this on the command line.
no i am simply drag and drop my pdbqt file in GUI