Hi,

Trying to polish pbmm2 bam output from Pacbio long read data using gcpp.

>|> 20250117 17:56:42.183 -|- FATAL -|- Run -|- 0x793d21863180|| -|- gcpp ERROR: [pbbam] read group ERROR: basecaller version is too short:

gcpp version 2.0.2-2.0.2

The bam file header:

@RG ID:default  PL:PACBIO   DS:READTYPE=UNKNOWN PU:default  SM:UnnamedSample    PM:SEQUEL

I tried replacing the header with:

samtools addreplacerg -r '@RG\tID:134g1\tPL:PACBIO\tPU:m84066_240627_194840\tDS=GeneratedBy:Sequel-II;Version:10.1.0\tSM:ChickenSample' \
    -o fixed.bam sorted.bam

My "fixed" bam header is now:

@PG ID:samtools.1   PN:samtools PP:samtools VN:1.13 CL:samtools addreplacerg -r @RG\tID:134g1\tPL:PACBIO\tPU:m84066_240627_194840\tDS:v10.1.0\tSM:ChickenSample -o fixed.bam sorted134g1broiler.bam
@RG ID:134g1    PL:PACBIO   PU:m84066_240627_194840 DS:v10.1.0  SM:ChickenSample

But it's still giving me the same error. What is the correct header ID?