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How can I check if a variant affects a TFBS?

Hi Everyone If I have a couple of variants, annotated with annovar (hg38). They clearly span a TFBS but I don't know how much they affect those TFBS. How can I check this? Thank you

variant tfbs
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written by Tania Tania

1 answer

Try motifbreakR, it does what you want.

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written by jared.andrews07 jared.andrews07

Great, will check that, thank you very much.

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written by Tania Tania

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