Hi, I have plink flat files (.map and .ped) of skim-seq data. These plink files have snp calls in ATGC format. I need to convert these ATGC in to 0125 format for input into BLUPF90 programs.

We tried to feed these plink files as snp_file into renumf90, that worked fine. But renumf90 output fed into BLUF90 threw error as - "Clean files will not be saved with plink format” and then program quits.

Now i am in need of how to generated 0125 format from plink file?

Anim Genotypes
 Id1  21101011002012011011010110111111211111210100
 Id2  21110101511101120221110111511112101112210100

Any idea is appreciated. Thanks.