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Analysis of Illumina Infinium MethylationEPIC v2.0

I am a very beginner in analyzing Infinium Methylation EPIC v2.0 array data. In particular I am working on the QC step. However, I see that existing packages, such as RNBeads and shinyMethyl, seem to be geared towards Infinium 450k. is it ok to use those? Would it make a difference?

Any insight, pointers or suggestions appreciated.

methylationepic infinium
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updated by fmueller • fmueller • written by ramiro.barrantes • ramiro.barrantes

1 answer

Yes, RnBeads fully supports all versions of the Infinium Assay

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written by fmueller • fmueller

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