More posts like this
-
Finding Similar Subsequences From Protein Sequences
written by jet •
-
Checking to see if .hhm file output makes sense
written by jet •
-
How to predict the affinity between Protein and RNA?
written by Alex •
-
pfam functional redundancy
written by timothy.kirkwood •
-
get domains of proteins
written by emanismail.92 •
-
Map genetic mutations to protein domain or structure with a higher resolution than UniProt
written by ejoffe •
-
Different Pfam and SMART protein domains..
written by kajaenilsen •
-
Protein ID and Protein domain ID description
written by Lalla •
-
Literature Mining For Domains Involved In Regeneration
written by James Ashmore •
-
Pfam Domain Annotation
written by Cotsapas
Search ""dna binding". Export the table as TSV from https://www.ebi.ac.uk/interpro/search/text/
Filter for PFAM, if you only need those.
Thanks for the reply. However, I would also like the domains that do not have dna-binding in their description, but still may bind to DNA (eg. HtH). In that case, will I have to filter that out manually as well, or is there another way to go about this?