This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Pediococcus acidilactici sequence analysis

I want to do Gene Ontology of Pediococcus acidilactici but this organism is not present at https://david.ncifcrf.gov/tools.jsp and https://biit.cs.ut.ee/gprofiler/gost.

Which Alternative Organism Can I take?

blast gene-ontology

1 answer

If you're looking for the GO annotations for Pediococcus acidilactici, these are available.

Using the instructions under 2. All other organisms on the GO website, you can find annotations from UniProt in the 277787.P_acidilactici_DSM_20284_1.goa file:

https://ftp.ebi.ac.uk/pub/databases/GO/goa/proteomes/277787.P_acidilactici_DSM_20284_1.goa

Log in to answer this question.