STAR --sjdbGTFfile in alignment step

Hi,

Just to clarify. In STAR, if --sjdbGTFfile was used in the genome indexing step it is no longer necessary to use the flag --sjdbGTFfile in the mapping step?

Thanks and good day.

star

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updated 2.4 years ago by dsull

• written 2.4 years ago by malonzm1 •

1 answer

That is correct

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written 2.4 years ago by dsull

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