GSEA or PEA with pearson correlations instead of log2foldchanges
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3 months ago
Tolga ▴ 30

Hi Community,

I used cellrank to find driver genes and want to do a subsequent enrichment analysis. Most tools like fgsea or clusterprofiler expect log2foldchanges but In this case I only have pearson correlation values.

Is this also legit?

Best,
Tolga

GSEA Enrichment-analysis PEA Cellrank • 184 views
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