Hello,

I am trying to export a VCF file in IMPUTE format and keep getting the same error message:

Code:

module load htslib/1.17
module load samtools/1.17
module load bcftools/1.17
module load java/17.0.8
module load python3
module load vcftools

vcftools --vcf name.vcf --IMPUTE

Error: Require Genotypes in VCF file in order to output IMPUTE format.

I am not sure why I am getting an error message because the genotypes are in the file. Here are the first few lines of my VCF file:

I would very much appreciate the help.