LD D-prime (D') calculation
Hi all,
I am trying to compute LD statistics with gaston package in R and plotting them, but I do not know how to obtain D' values. I do obtain r2 and D values but I would very interested in D' statistic. Is it possible to calculate it? Do you know another resource in order to do it?
I tried Haploview but it seems that there is an error exporting the images and Snpstats/Snpmatrix packages are not working because they are not available to install.
Many thanks
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