Fastest way to find private SNPs for each sample
Hello
I have 20 VCF files, each representing a single sample, containing SNPs. I have to know, for each sample, what SNPs are private to this sample. What are the options. So far I am usinb bcftools isec, but I am not sure I use it properly
bcftools isec -p dir -n-1 -c all *.vcf.gz
Is it the correct way to use it?
Thanks
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