Illumina's Genome Studio Final Report: TOP to FORWARD
Hello, I have a final report from Illumina genotyping generated in two ways:
- Name,Chromosome,Position,GenTrain Score,SNP,ILMN Strand,Customer Strand,NormID
And
- SNP Name,Sample ID,Allele1 - AB,Allele2 - AB,GC Score
I also have a file with transformed AB to probably the TOP coding which is not what I'm looking for.
I need SNPs coding in Forward. Which column ILMN Strand or Customer Strand tells me about the genome reference in 5'-3' direction?
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