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How to extract the allele dosage of .vcf.gz after TOPMed imputation?

Hello!

After TOPMed imputation I have from each chromosome thwo types of files:

  • .vcf.gz
    • .info.gz

In the vcf.gz file I have the letter of the allele but, I need the allele dosage. How can I do this and get a vcf.gz file back?

Thanks in advance!

plink allele gwas dosage

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