This is a test version of Biostars. For the public version, visit https://www.biostars.org.
SAMtools error closing standard output: -1

Command:

samtools view -bS E00192a.sam > E00192.bam

[E::bgzf_flush] File write failed (wrong size)
[main_samview] failed to write the SAM header
samtools view: error closing standard output: -1

What's the cause of this error and any ways to solve this problem?

bam samtools

0 answers

No answers yet.

Log in to answer this question.