Hello,

I want to understand the output file Solo.out/GeneFull_Ex50pAS/CellReads.stats from STARsolo with options --soloCellReadStats Standard and --soloFeatures GeneFull_Ex50pAS but I don't find any manual or instruction on the signification of each column, neither in the STAR manual.

The columns are: CB cbMatch cbPerfect cbMMunique cbMMmultiple genomeU genomeM featureU featureM exonic intronic exonicAS intronicAS mito countedU countedM nUMIunique nGenesUnique nUMImulti nGenesMulti

And the file looks like:

I want to know for each read if the read is intronic or exonic type.

Thanks