This is a test version of Biostars. For the public version, visit https://www.biostars.org.
ATAC: Finding peaks in BW file

I'm trying to analyze this ATAC dataset. Does anyone know if the bw files in the supplementary data the peaks themselves, or do I need to process them further to get the peaks? I opened one of them using import.bw from rtracklayer, and the GRanges object contains around 35M ranges, which seems like a lot. Is each range a peak, or do I need to filter them somehow?

atac bigwig

0 answers

No answers yet.

Log in to answer this question.