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COG clustering

How to use COGs for clustering? How to use API? its bit confusing

cog
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updated by moshi 15 • | written by Shweta 0

What are you trying to achieve? COGs are clusters. There are more API's than I can count. Please be more specific about what you would like to do, and where you might be stuck. You might find this guide to asking good questions helpful.

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written by seidel 1.1K

Hey, Thanks for that, I want to ask how to use the COG database for clustering. I have a set of protein sequences of bacteria and viruses and want to do functional annotation of those proteins, How can I use COG?

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written by Shweta 0

If your goal is functional classification (annotation) of protein sequences using the COG database, COGclassifier may be useful.

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written by moshi 15

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