Tripal installation question · Biostar

This is a test version of Biostars. For the public version, visit https://www.biostars.org.

Tripal installation question

Hi all. Trying to find my way with Tripal. I am following the instructions for the installation and it becomes kind of a tricky quest. Hoping to find some answers here. So my server is on Ubuntu 22. I hava an Apach 2.0, PHP 8.1 and Postgresql 13. I am trying to install Drush, and not sure that I get the instructions correctly. There is no drush.phar file in the latest repository. Should I download only Drush 8.0 for Drupal? Not sure what to do...

biodb drush tripal drupal

• 1,054 views • link

written 3.5 years ago by alslonik

1 answer

Answering myself to close the issue. Contacted Tripal project team on Slack. They advised me to follow installation with Docker. https://tripal4.readthedocs.io/en/latest/install/docker.html.

• 0 views • link

written 3.5 years ago by alslonik

Log in to answer this question.

More posts like this

Help installing and running PITA & PicTar for miRNA target prediction
written 12 months ago by Andie •

I’m working with microRNAs and insect genomes to predict gene targets. So far, I’ve used miRanda and RNAhybrid, but I’d like to add three more …
rMATS-turbo build_rmats --conda issue: Run 'conda init' before 'conda activate'
written 2.1 years ago by Angelos •

Hello, So after cloning the repository from [rmats-turbo][1] and installing all the dependencies , I am trying to run **build_rmats --conda**, but keep getting the …
Run Cellranger-ATAC on CNGB fastq files
written 2.5 years ago by TomCat •

I'm trying to run cellranger-atac(2.1.0) from dataset of this article: https://www.cell.com/cell-reports/fulltext/S2211-1247(22)00765-3?_returnURL=https%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2FS2211124722007653%3Fshowall%3Dtrue I have downloaded G3 stage fastq files from here (https://db.cngb.org/search/run/CNR0183377/) and renamed file names …
Use BLAST Command Line Applications to run a folder of many sequences against a database
written 5.0 years ago by daver.v •

Hi everyone, I am quite new to using the BLAST Command Line Applications and would love any and all help. I am trying to use …
Canu installation, error with GCC compiler
written 6.3 years ago by dicenhour •

I am trying to install canu-2.0 on my computer but when I try to build it I keep getting the following error: Canu cannot be …
Problems when installing Grapes and Bio++ tools
written 7.0 years ago by spiral01

Hi, I am trying to install Grapes (available [here](https://github.com/BioPP/grapes)). I have already installed Bio++ using the instructions given [here](http://biopp.univ-montp2.fr/wiki/index.php/Installation). The Bio++ installation goes off fine, …
package gwascat is not available for R version 3.4.4
written 8.2 years ago by daviqd.halvorsen •

Hello! I am trying to install the 'gwascat' package, from Bioconductor, for RStudio without success. I'd like to repeat the [23andMe data analysis protocol I …
Problems installing devtools in R
written 9.2 years ago by sgmiriuka •

Hi there, I am having many troubles installing devtools in R (Ubuntu 16-04). No problems in OSX, but not sure why I can't get anywhere …
MuSic Pfam file path in Linux RHEL
written 11.7 years ago by Nitish Mishra •

Hi, I am trying to use MuSic for pfam annotation on **Linux RHEL system**. I already downloaded pfam, cosmic-omim data ([genome-databases_1-1.tar.gz][1]) in my home directory …
Undefined References From Boost When Installing Bam-Readcount
written 12.5 years ago by sally.boyd •

I am trying to install bam-readcount in a centralized location for our cluster, which means downloading "source" and building in a non-standard location. I built …