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Error in running Viscap

Dear all,

I want to use VisCap for my run but I have the following error message :

Attaching package: ‘gplots’

The following object is masked from ‘package:stats’: lowess

Attaching package: ‘zoo’

The following objects are masked from ‘package:base’: as.Date, as.Date.numeric

[1] "dpt/./2336.sample_interval_summary" Error in matrix(tab[, col_name], dimnames = list(rownames(tab), new_head)) : length of 'dimnames' [1] not equal to array extent Calls: make_matrix_from_cov_files -> matrix Execution halted

I have generated output files from GATK v.4.3.0.0 DepthOfCov but it seems that something is wrong and I really do not understand why...

Does anybody have an idea please ?

Thank you in advance.

ngs cnv viscap

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