Aggregating my ASVs in a phylogenetic tree like in ARB
Hi, I have over 2K ASVs and I want to contruct a phylogenetic tree using phyloseq and ggtree. I am aware of the tip_glom() function but I don't like how they grouped the ASVs. What I envisioned to be the output is similar to an output you get when using ARB. I was wondering, if there is an existing R package an function to achieve this kind of phylogenetic tree. Thank you so much.
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