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protein-protein docking

can anyone suggest me a standalone tool for protein-protein docking? I have two proteins 3d structures to be docked with each other.

protein-protein interaction docking

I have not run the tool outside a classroom exercise, but the Amber Suite should be able to do what you need.

1 answer

You can perform protein-protein docking with Schrodinger software.

See this: https://www.schrodinger.com/kb/574

Also, the HDOCK server can be used for docking.

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