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Databases with Genes <-> Diseases relations

Warning Genes may be involved in diseases in various various ways which is difficult to put in databases (I know that), still for starting point:

Question What are databases (with possibly Python interfaces) which describe genes <-> diseases relations ? What are the survey papers on that topic ?


My feeling that information is somewhat scattered, hopefully I am wrong.

Some examples of scattered information:

For ALS ((Amyotrophic lateral sclerosis) - see here https://alsod.ac.uk/ (some notebook describing genes interacting with them https://www.kaggle.com/code/alexandervc/genes-interacting-with-als-genes)

For e.g. Ewing Sarcoma - Ewing sarcoma "related" genes ?

And so on.

cancer genes

3 answers

DISEASES is a web resource that integrates evidence on disease-gene associations from automatic text mining, manually curated literature, cancer mutation data, and genome-wide association studies.

OMIM for the single gene disorders https://www.omim.org/

https://www.disgenet.org/ exists

Use cases make a one size fits all highly unlikely

ClinGen https://search.clinicalgenome.org/kb/gene-validity

GenCC https://thegencc.org/

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