problem about snpflip
The bim file is for autosomes 1 to 22, then the fa file also takes chromosomes 1 to 22 and simplifies the sequence names to numbers 1 2 3, but it runs with the following error
KeyError:'R'
Why does this happen?
• 596 views
•
link
written
by
dongxinyu510 •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Problem with SHAPEIT
written by dongxinyu510 •
-
Merge only bim files with plink
written by mgdrnl •
-
--chr-set PLINK
written by Matteo •
-
Handing scafflold names for plink bed file
written by nitinra •
-
PLINK does not uncompress GZ file automatically, why?
written by odeta.xjd •
-
Tool: snpflip finds reverse and ambiguous strand SNPs
written by Endre Bakken Stovner
-
What would make fasta file indexing stop prematurely?
written by oliver.bayfield •
-
A problem about the download of the human genome in defuse
written by jiagehao •
-
nan in .bim file generated by plink
written by dharl •
-
Cuffmerge Is Looking For Contig Fasta Files That I Do Not Have!
written by jobinv
