This is a test version of Biostars. For the public version, visit https://www.biostars.org.
List of cyanobacterial refseq genomes

Hi, I need a hand finding or creating a complete list of all cyanobacterial genomes in NCBI RefSeq. I've tried searching in Genomes and landed in NCBI Datasets at some point, neither of which gave me the list I need. I'm at a loss and hoping there's just something I don't understand about searching NCBI. Thank you in advance for your help!

cyanobacteria refseq

1 answer

Go to: https://www.ncbi.nlm.nih.gov/data-hub/genome/?taxon=1117&annotated_only=true&refseq_annotation=true

Check the box marked below to select 1171 genomes (as of today) and then hit Download (download package to get sequence) button. If you only want a list then choose download table.

datasets

Oh, that was easy, I feel so silly now. Thank you so, so much, you've really saved my life.

Log in to answer this question.